Gene : SSL2 A. thaliana TAIR10
Primary Identifier:  ? AT2G41290 Defline:  (1 of 1) PTHR10426//PTHR10426:SF29 - STRICTOSIDINE SYNTHASE-RELATED // SUBFAMILY NOT NAMED
Genomic Order:  3523 Name:  ? AT2G41290
Secondary Identifier:  ? PAC:19642905
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G41290 0.5kb upstream 0.5kb upstream 3032 true Chr2: 17210428-17213459 Arabidopsis thaliana
AT2G41290 0.5kb upstream 0.5kb upstream 500 false Chr2: 17212960-17213459 Arabidopsis thaliana
AT2G41290 0.5kb downstream 0.5kb downstream 3032 true Chr2: 17209928-17212959 Arabidopsis thaliana
AT2G41290 0.5kb downstream 0.5kb downstream 500 false Chr2: 17209928-17210427 Arabidopsis thaliana
AT2G41290 1.0kb upstream 1.0kb upstream 3532 true Chr2: 17210428-17213959 Arabidopsis thaliana
AT2G41290 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17212960-17213959 Arabidopsis thaliana
AT2G41290 1.0kb downstream 1.0kb downstream 3532 true Chr2: 17209428-17212959 Arabidopsis thaliana
AT2G41290 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17209428-17210427 Arabidopsis thaliana
AT2G41290 2.0kb upstream 2.0kb upstream 4532 true Chr2: 17210428-17214959 Arabidopsis thaliana
AT2G41290 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17212960-17214959 Arabidopsis thaliana
AT2G41290 2.0kb downstream 2.0kb downstream 4532 true Chr2: 17208428-17212959 Arabidopsis thaliana
AT2G41290 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17208428-17210427 Arabidopsis thaliana
AT2G41290 5.0kb upstream 5.0kb upstream 7532 true Chr2: 17210428-17217959 Arabidopsis thaliana
AT2G41290 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17212960-17217959 Arabidopsis thaliana
AT2G41290 5.0kb downstream 5.0kb downstream 7532 true Chr2: 17205428-17212959 Arabidopsis thaliana
AT2G41290 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17205428-17210427 Arabidopsis thaliana
AT2G41290 10.0kb upstream 10.0kb upstream 12532 true Chr2: 17210428-17222959 Arabidopsis thaliana
AT2G41290 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17212960-17222959 Arabidopsis thaliana
AT2G41290 10.0kb downstream 10.0kb downstream 12532 true Chr2: 17200428-17212959 Arabidopsis thaliana
AT2G41290 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17200428-17210427 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366925 5261 Brassicaceae View MSA
123835863 5264 Brassicales-Malvales View MSA
124350034 5266 SBM View MSA
124250330 5268 Malvidae View MSA
124066148 5270 Rosid View MSA
123745070 5271 Pentapetalae View MSA
122791794 5272 Eudicot View MSA
122047810 5273 Angiosperm View MSA
121350347 5274 Embryophyte View MSA
123427583 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.759        
cufflinks 0.581       Low
cufflinks 0.65        
cufflinks 0.633        
cufflinks 0.793        
cufflinks 1.013       High

0 Strain