Gene : AT2G41060 A. thaliana TAIR10
Defline:  (1 of 3) PTHR24012:SF490 - UBP1-ASSOCIATED PROTEIN 2C Genomic Order:  3497
Name:  ? AT2G41060 Secondary Identifier:  ? PAC:19638287
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G41060 0.5kb upstream 0.5kb upstream 3075 true Chr2: 17126489-17129563 Arabidopsis thaliana
AT2G41060 0.5kb upstream 0.5kb upstream 500 false Chr2: 17126489-17126988 Arabidopsis thaliana
AT2G41060 0.5kb downstream 0.5kb downstream 3075 true Chr2: 17126989-17130063 Arabidopsis thaliana
AT2G41060 0.5kb downstream 0.5kb downstream 500 false Chr2: 17129564-17130063 Arabidopsis thaliana
AT2G41060 1.0kb upstream 1.0kb upstream 3575 true Chr2: 17125989-17129563 Arabidopsis thaliana
AT2G41060 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17125989-17126988 Arabidopsis thaliana
AT2G41060 1.0kb downstream 1.0kb downstream 3575 true Chr2: 17126989-17130563 Arabidopsis thaliana
AT2G41060 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17129564-17130563 Arabidopsis thaliana
AT2G41060 2.0kb upstream 2.0kb upstream 4575 true Chr2: 17124989-17129563 Arabidopsis thaliana
AT2G41060 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17124989-17126988 Arabidopsis thaliana
AT2G41060 2.0kb downstream 2.0kb downstream 4575 true Chr2: 17126989-17131563 Arabidopsis thaliana
AT2G41060 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17129564-17131563 Arabidopsis thaliana
AT2G41060 5.0kb upstream 5.0kb upstream 7575 true Chr2: 17121989-17129563 Arabidopsis thaliana
AT2G41060 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17121989-17126988 Arabidopsis thaliana
AT2G41060 5.0kb downstream 5.0kb downstream 7575 true Chr2: 17126989-17134563 Arabidopsis thaliana
AT2G41060 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17129564-17134563 Arabidopsis thaliana
AT2G41060 10.0kb upstream 10.0kb upstream 12575 true Chr2: 17116989-17129563 Arabidopsis thaliana
AT2G41060 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17116989-17126988 Arabidopsis thaliana
AT2G41060 10.0kb downstream 10.0kb downstream 12575 true Chr2: 17126989-17139563 Arabidopsis thaliana
AT2G41060 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17129564-17139563 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368996 5261 Brassicaceae View MSA
123840806 5264 Brassicales-Malvales View MSA
124342346 5266 SBM View MSA
124254160 5268 Malvidae View MSA
124069346 5270 Rosid View MSA
123739331 5271 Pentapetalae View MSA
122793015 5272 Eudicot View MSA
122047267 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121310718 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.528       Low
cufflinks 10.343       High
cufflinks 5.962        
cufflinks 10.736       High
cufflinks 5.837        
cufflinks 8.087        

0 Strain