Gene : AT2G43030 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11229:SF5 - 50S RIBOSOMAL PROTEIN L3-1, CHLOROPLASTIC Genomic Order:  3705
Name:  ? AT2G43030 Secondary Identifier:  ? PAC:19638672
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G43030 0.5kb upstream 0.5kb upstream 1531 true Chr2: 17894336-17895866 Arabidopsis thaliana
AT2G43030 0.5kb upstream 0.5kb upstream 500 false Chr2: 17894336-17894835 Arabidopsis thaliana
AT2G43030 0.5kb downstream 0.5kb downstream 1531 true Chr2: 17894836-17896366 Arabidopsis thaliana
AT2G43030 0.5kb downstream 0.5kb downstream 500 false Chr2: 17895867-17896366 Arabidopsis thaliana
AT2G43030 1.0kb upstream 1.0kb upstream 2031 true Chr2: 17893836-17895866 Arabidopsis thaliana
AT2G43030 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17893836-17894835 Arabidopsis thaliana
AT2G43030 1.0kb downstream 1.0kb downstream 2031 true Chr2: 17894836-17896866 Arabidopsis thaliana
AT2G43030 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17895867-17896866 Arabidopsis thaliana
AT2G43030 2.0kb upstream 2.0kb upstream 3031 true Chr2: 17892836-17895866 Arabidopsis thaliana
AT2G43030 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17892836-17894835 Arabidopsis thaliana
AT2G43030 2.0kb downstream 2.0kb downstream 3031 true Chr2: 17894836-17897866 Arabidopsis thaliana
AT2G43030 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17895867-17897866 Arabidopsis thaliana
AT2G43030 5.0kb upstream 5.0kb upstream 6031 true Chr2: 17889836-17895866 Arabidopsis thaliana
AT2G43030 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17889836-17894835 Arabidopsis thaliana
AT2G43030 5.0kb downstream 5.0kb downstream 6031 true Chr2: 17894836-17900866 Arabidopsis thaliana
AT2G43030 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17895867-17900866 Arabidopsis thaliana
AT2G43030 10.0kb upstream 10.0kb upstream 11031 true Chr2: 17884836-17895866 Arabidopsis thaliana
AT2G43030 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17884836-17894835 Arabidopsis thaliana
AT2G43030 10.0kb downstream 10.0kb downstream 11031 true Chr2: 17894836-17905866 Arabidopsis thaliana
AT2G43030 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17895867-17905866 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361264 5261 Brassicaceae View MSA
123827848 5264 Brassicales-Malvales View MSA
124339613 5266 SBM View MSA
124240687 5268 Malvidae View MSA
124065748 5270 Rosid View MSA
123738744 5271 Pentapetalae View MSA
122789869 5272 Eudicot View MSA
122045324 5273 Angiosperm View MSA
121345388 5274 Embryophyte View MSA
123425117 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 345.955     High  
cufflinks 25.438        
cufflinks 461.124     High High
cufflinks 23.66        
cufflinks 334.263     High  
cufflinks 19.661       Low

0 Strain