Gene : AT2G40780 A. thaliana TAIR10
Defline:  (1 of 1) K15025 - probable RNA-binding protein EIF1AD (EIF1AD) Genomic Order:  3464
Name:  ? AT2G40780 Secondary Identifier:  ? PAC:19642856
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G40780 0.5kb upstream 0.5kb upstream 1912 true Chr2: 17021005-17022916 Arabidopsis thaliana
AT2G40780 0.5kb upstream 0.5kb upstream 500 false Chr2: 17021005-17021504 Arabidopsis thaliana
AT2G40780 0.5kb downstream 0.5kb downstream 1912 true Chr2: 17021505-17023416 Arabidopsis thaliana
AT2G40780 0.5kb downstream 0.5kb downstream 500 false Chr2: 17022917-17023416 Arabidopsis thaliana
AT2G40780 1.0kb upstream 1.0kb upstream 2412 true Chr2: 17020505-17022916 Arabidopsis thaliana
AT2G40780 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17020505-17021504 Arabidopsis thaliana
AT2G40780 1.0kb downstream 1.0kb downstream 2412 true Chr2: 17021505-17023916 Arabidopsis thaliana
AT2G40780 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17022917-17023916 Arabidopsis thaliana
AT2G40780 2.0kb upstream 2.0kb upstream 3412 true Chr2: 17019505-17022916 Arabidopsis thaliana
AT2G40780 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17019505-17021504 Arabidopsis thaliana
AT2G40780 2.0kb downstream 2.0kb downstream 3412 true Chr2: 17021505-17024916 Arabidopsis thaliana
AT2G40780 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17022917-17024916 Arabidopsis thaliana
AT2G40780 5.0kb upstream 5.0kb upstream 6412 true Chr2: 17016505-17022916 Arabidopsis thaliana
AT2G40780 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17016505-17021504 Arabidopsis thaliana
AT2G40780 5.0kb downstream 5.0kb downstream 6412 true Chr2: 17021505-17027916 Arabidopsis thaliana
AT2G40780 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17022917-17027916 Arabidopsis thaliana
AT2G40780 10.0kb upstream 10.0kb upstream 11412 true Chr2: 17011505-17022916 Arabidopsis thaliana
AT2G40780 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17011505-17021504 Arabidopsis thaliana
AT2G40780 10.0kb downstream 10.0kb downstream 11412 true Chr2: 17021505-17032916 Arabidopsis thaliana
AT2G40780 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17022917-17032916 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363330 5261 Brassicaceae View MSA
123832904 5264 Brassicales-Malvales View MSA
124321831 5266 SBM View MSA
124242455 5268 Malvidae View MSA
124074389 5270 Rosid View MSA
123739178 5271 Pentapetalae View MSA
122790312 5272 Eudicot View MSA
122047089 5273 Angiosperm View MSA
121344267 5274 Embryophyte View MSA
123425448 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.285        
cufflinks 2.344        
cufflinks 1.683       Low
cufflinks 2.318        
cufflinks 1.789       Low
cufflinks 2.786       High

0 Strain