Gene : AT2G40925 A. thaliana TAIR10
Defline:  (1 of 78) PF00646//PF08268 - F-box domain (F-box) // F-box associated domain (FBA_3) Genomic Order:  3480
Name:  ? AT2G40925 Secondary Identifier:  ? PAC:19640631
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G40925 0.5kb upstream 0.5kb upstream 1835 true Chr2: 17074905-17076739 Arabidopsis thaliana
AT2G40925 0.5kb upstream 0.5kb upstream 500 false Chr2: 17076240-17076739 Arabidopsis thaliana
AT2G40925 0.5kb downstream 0.5kb downstream 1835 true Chr2: 17074405-17076239 Arabidopsis thaliana
AT2G40925 0.5kb downstream 0.5kb downstream 500 false Chr2: 17074405-17074904 Arabidopsis thaliana
AT2G40925 1.0kb upstream 1.0kb upstream 2335 true Chr2: 17074905-17077239 Arabidopsis thaliana
AT2G40925 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17076240-17077239 Arabidopsis thaliana
AT2G40925 1.0kb downstream 1.0kb downstream 2335 true Chr2: 17073905-17076239 Arabidopsis thaliana
AT2G40925 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17073905-17074904 Arabidopsis thaliana
AT2G40925 2.0kb upstream 2.0kb upstream 3335 true Chr2: 17074905-17078239 Arabidopsis thaliana
AT2G40925 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17076240-17078239 Arabidopsis thaliana
AT2G40925 2.0kb downstream 2.0kb downstream 3335 true Chr2: 17072905-17076239 Arabidopsis thaliana
AT2G40925 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17072905-17074904 Arabidopsis thaliana
AT2G40925 5.0kb upstream 5.0kb upstream 6335 true Chr2: 17074905-17081239 Arabidopsis thaliana
AT2G40925 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17076240-17081239 Arabidopsis thaliana
AT2G40925 5.0kb downstream 5.0kb downstream 6335 true Chr2: 17069905-17076239 Arabidopsis thaliana
AT2G40925 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17069905-17074904 Arabidopsis thaliana
AT2G40925 10.0kb upstream 10.0kb upstream 11335 true Chr2: 17074905-17086239 Arabidopsis thaliana
AT2G40925 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17076240-17086239 Arabidopsis thaliana
AT2G40925 10.0kb downstream 10.0kb downstream 11335 true Chr2: 17064905-17076239 Arabidopsis thaliana
AT2G40925 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17064905-17074904 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380961 5261 Brassicaceae View MSA
123802989 5264 Brassicales-Malvales View MSA
124300132 5266 SBM View MSA
124252683 5268 Malvidae View MSA
124074667 5270 Rosid View MSA
123753263 5271 Pentapetalae View MSA
122797953 5272 Eudicot View MSA
122051694 5273 Angiosperm View MSA
121351156 5274 Embryophyte View MSA
123382030 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.011     Low Low
cufflinks 0.114     Low  
cufflinks 0.011     Low Low
cufflinks 0.139     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.087     Low  

0 Strain