Gene : AT2G40480 A. thaliana TAIR10
Defline:  (1 of 13) PF05701 - Weak chloroplast movement under blue light (WEMBL) Genomic Order:  3432
Name:  ? AT2G40480 Secondary Identifier:  ? PAC:19639769
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G40480 0.5kb upstream 0.5kb upstream 2729 true Chr2: 16909864-16912592 Arabidopsis thaliana
AT2G40480 0.5kb upstream 0.5kb upstream 500 false Chr2: 16909864-16910363 Arabidopsis thaliana
AT2G40480 0.5kb downstream 0.5kb downstream 2729 true Chr2: 16910364-16913092 Arabidopsis thaliana
AT2G40480 0.5kb downstream 0.5kb downstream 500 false Chr2: 16912593-16913092 Arabidopsis thaliana
AT2G40480 1.0kb upstream 1.0kb upstream 3229 true Chr2: 16909364-16912592 Arabidopsis thaliana
AT2G40480 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16909364-16910363 Arabidopsis thaliana
AT2G40480 1.0kb downstream 1.0kb downstream 3229 true Chr2: 16910364-16913592 Arabidopsis thaliana
AT2G40480 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16912593-16913592 Arabidopsis thaliana
AT2G40480 2.0kb upstream 2.0kb upstream 4229 true Chr2: 16908364-16912592 Arabidopsis thaliana
AT2G40480 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16908364-16910363 Arabidopsis thaliana
AT2G40480 2.0kb downstream 2.0kb downstream 4229 true Chr2: 16910364-16914592 Arabidopsis thaliana
AT2G40480 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16912593-16914592 Arabidopsis thaliana
AT2G40480 5.0kb upstream 5.0kb upstream 7229 true Chr2: 16905364-16912592 Arabidopsis thaliana
AT2G40480 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16905364-16910363 Arabidopsis thaliana
AT2G40480 5.0kb downstream 5.0kb downstream 7229 true Chr2: 16910364-16917592 Arabidopsis thaliana
AT2G40480 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16912593-16917592 Arabidopsis thaliana
AT2G40480 10.0kb upstream 10.0kb upstream 12229 true Chr2: 16900364-16912592 Arabidopsis thaliana
AT2G40480 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16900364-16910363 Arabidopsis thaliana
AT2G40480 10.0kb downstream 10.0kb downstream 12229 true Chr2: 16910364-16922592 Arabidopsis thaliana
AT2G40480 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16912593-16922592 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362069 5261 Brassicaceae View MSA
123836274 5264 Brassicales-Malvales View MSA
124342573 5266 SBM View MSA
124239640 5268 Malvidae View MSA
124068222 5270 Rosid View MSA
123738917 5271 Pentapetalae View MSA
122794264 5272 Eudicot View MSA
122043460 5273 Angiosperm View MSA
121351750 5274 Embryophyte View MSA
123382308 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.042        
cufflinks 80.015     High  
cufflinks 3.744        
cufflinks 49.287     High  
cufflinks 2.444       Low
cufflinks 83.211     High High

0 Strain