Gene : GolS1 A. thaliana TAIR10
Primary Identifier:  ? AT2G47180 Defline:  (1 of 3) PTHR11183//PTHR11183:SF59 - GLYCOGENIN // GALACTINOL SYNTHASE 2-RELATED
Genomic Order:  4147 Name:  ? AT2G47180
Secondary Identifier:  ? PAC:19641398
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5337 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G47180 0.5kb upstream 0.5kb upstream 2144 true Chr2: 19368798-19370941 Arabidopsis thaliana
AT2G47180 0.5kb upstream 0.5kb upstream 500 false Chr2: 19370442-19370941 Arabidopsis thaliana
AT2G47180 0.5kb downstream 0.5kb downstream 2144 true Chr2: 19368298-19370441 Arabidopsis thaliana
AT2G47180 0.5kb downstream 0.5kb downstream 500 false Chr2: 19368298-19368797 Arabidopsis thaliana
AT2G47180 1.0kb upstream 1.0kb upstream 2644 true Chr2: 19368798-19371441 Arabidopsis thaliana
AT2G47180 1.0kb upstream 1.0kb upstream 1000 false Chr2: 19370442-19371441 Arabidopsis thaliana
AT2G47180 1.0kb downstream 1.0kb downstream 2644 true Chr2: 19367798-19370441 Arabidopsis thaliana
AT2G47180 1.0kb downstream 1.0kb downstream 1000 false Chr2: 19367798-19368797 Arabidopsis thaliana
AT2G47180 2.0kb upstream 2.0kb upstream 3644 true Chr2: 19368798-19372441 Arabidopsis thaliana
AT2G47180 2.0kb upstream 2.0kb upstream 2000 false Chr2: 19370442-19372441 Arabidopsis thaliana
AT2G47180 2.0kb downstream 2.0kb downstream 3644 true Chr2: 19366798-19370441 Arabidopsis thaliana
AT2G47180 2.0kb downstream 2.0kb downstream 2000 false Chr2: 19366798-19368797 Arabidopsis thaliana
AT2G47180 5.0kb upstream 5.0kb upstream 6644 true Chr2: 19368798-19375441 Arabidopsis thaliana
AT2G47180 5.0kb upstream 5.0kb upstream 5000 false Chr2: 19370442-19375441 Arabidopsis thaliana
AT2G47180 5.0kb downstream 5.0kb downstream 6644 true Chr2: 19363798-19370441 Arabidopsis thaliana
AT2G47180 5.0kb downstream 5.0kb downstream 5000 false Chr2: 19363798-19368797 Arabidopsis thaliana
AT2G47180 10.0kb upstream 10.0kb upstream 11644 true Chr2: 19368798-19380441 Arabidopsis thaliana
AT2G47180 10.0kb upstream 10.0kb upstream 10000 false Chr2: 19370442-19380441 Arabidopsis thaliana
AT2G47180 10.0kb downstream 10.0kb downstream 11644 true Chr2: 19358798-19370441 Arabidopsis thaliana
AT2G47180 10.0kb downstream 10.0kb downstream 10000 false Chr2: 19358798-19368797 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365540 5261 Brassicaceae View MSA
123829587 5264 Brassicales-Malvales View MSA
124341086 5266 SBM View MSA
124253823 5268 Malvidae View MSA
124072040 5270 Rosid View MSA
123746069 5271 Pentapetalae View MSA
122793646 5272 Eudicot View MSA
122046900 5273 Angiosperm View MSA
121310671 5274 Embryophyte View MSA
123348097 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.455       Low
cufflinks 91.079     High  
cufflinks 10.218        
cufflinks 131.793     High High
cufflinks 19.933        
cufflinks 37.901     High  

0 Strain