Gene : Bradi1g00335 B. distachyon v3.1
Genomic Order:  22 Name:  ? Bradi1g00335
Secondary Identifier:  ? PAC:32803766
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g00335 0.5kb upstream 0.5kb upstream 3226 true Bd1: 243875-247100 Brachypodium distachyon
Bradi1g00335 0.5kb upstream 0.5kb upstream 500 false Bd1: 243875-244374 Brachypodium distachyon
Bradi1g00335 0.5kb downstream 0.5kb downstream 3226 true Bd1: 244375-247600 Brachypodium distachyon
Bradi1g00335 0.5kb downstream 0.5kb downstream 500 false Bd1: 247101-247600 Brachypodium distachyon
Bradi1g00335 1.0kb upstream 1.0kb upstream 3726 true Bd1: 243375-247100 Brachypodium distachyon
Bradi1g00335 1.0kb upstream 1.0kb upstream 1000 false Bd1: 243375-244374 Brachypodium distachyon
Bradi1g00335 1.0kb downstream 1.0kb downstream 3726 true Bd1: 244375-248100 Brachypodium distachyon
Bradi1g00335 1.0kb downstream 1.0kb downstream 1000 false Bd1: 247101-248100 Brachypodium distachyon
Bradi1g00335 2.0kb upstream 2.0kb upstream 4726 true Bd1: 242375-247100 Brachypodium distachyon
Bradi1g00335 2.0kb upstream 2.0kb upstream 2000 false Bd1: 242375-244374 Brachypodium distachyon
Bradi1g00335 2.0kb downstream 2.0kb downstream 4726 true Bd1: 244375-249100 Brachypodium distachyon
Bradi1g00335 2.0kb downstream 2.0kb downstream 2000 false Bd1: 247101-249100 Brachypodium distachyon
Bradi1g00335 5.0kb upstream 5.0kb upstream 7726 true Bd1: 239375-247100 Brachypodium distachyon
Bradi1g00335 5.0kb upstream 5.0kb upstream 5000 false Bd1: 239375-244374 Brachypodium distachyon
Bradi1g00335 5.0kb downstream 5.0kb downstream 7726 true Bd1: 244375-252100 Brachypodium distachyon
Bradi1g00335 5.0kb downstream 5.0kb downstream 5000 false Bd1: 247101-252100 Brachypodium distachyon
Bradi1g00335 10.0kb upstream 10.0kb upstream 12726 true Bd1: 234375-247100 Brachypodium distachyon
Bradi1g00335 10.0kb upstream 10.0kb upstream 10000 false Bd1: 234375-244374 Brachypodium distachyon
Bradi1g00335 10.0kb downstream 10.0kb downstream 12726 true Bd1: 244375-257100 Brachypodium distachyon
Bradi1g00335 10.0kb downstream 10.0kb downstream 10000 false Bd1: 247101-257100 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122006147 5273 Angiosperm View MSA
124590470 5269 Grass View MSA
121276265 5274 Embryophyte View MSA
123314552 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.042     Low High
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low High

0 Strain