Gene : Bradi1g00450 B. distachyon v3.1
Defline:  (1 of 2) PTHR22957//PTHR22957:SF273 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  46
Name:  ? Bradi1g00450 Secondary Identifier:  ? PAC:32800919
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g00450 0.5kb upstream 0.5kb upstream 4347 true Bd1: 383644-387990 Brachypodium distachyon
Bradi1g00450 0.5kb upstream 0.5kb upstream 500 false Bd1: 387491-387990 Brachypodium distachyon
Bradi1g00450 0.5kb downstream 0.5kb downstream 4347 true Bd1: 383144-387490 Brachypodium distachyon
Bradi1g00450 0.5kb downstream 0.5kb downstream 500 false Bd1: 383144-383643 Brachypodium distachyon
Bradi1g00450 1.0kb upstream 1.0kb upstream 4847 true Bd1: 383644-388490 Brachypodium distachyon
Bradi1g00450 1.0kb upstream 1.0kb upstream 1000 false Bd1: 387491-388490 Brachypodium distachyon
Bradi1g00450 1.0kb downstream 1.0kb downstream 4847 true Bd1: 382644-387490 Brachypodium distachyon
Bradi1g00450 1.0kb downstream 1.0kb downstream 1000 false Bd1: 382644-383643 Brachypodium distachyon
Bradi1g00450 2.0kb upstream 2.0kb upstream 5847 true Bd1: 383644-389490 Brachypodium distachyon
Bradi1g00450 2.0kb upstream 2.0kb upstream 2000 false Bd1: 387491-389490 Brachypodium distachyon
Bradi1g00450 2.0kb downstream 2.0kb downstream 5847 true Bd1: 381644-387490 Brachypodium distachyon
Bradi1g00450 2.0kb downstream 2.0kb downstream 2000 false Bd1: 381644-383643 Brachypodium distachyon
Bradi1g00450 5.0kb upstream 5.0kb upstream 8847 true Bd1: 383644-392490 Brachypodium distachyon
Bradi1g00450 5.0kb upstream 5.0kb upstream 5000 false Bd1: 387491-392490 Brachypodium distachyon
Bradi1g00450 5.0kb downstream 5.0kb downstream 8847 true Bd1: 378644-387490 Brachypodium distachyon
Bradi1g00450 5.0kb downstream 5.0kb downstream 5000 false Bd1: 378644-383643 Brachypodium distachyon
Bradi1g00450 10.0kb upstream 10.0kb upstream 13847 true Bd1: 383644-397490 Brachypodium distachyon
Bradi1g00450 10.0kb upstream 10.0kb upstream 10000 false Bd1: 387491-397490 Brachypodium distachyon
Bradi1g00450 10.0kb downstream 10.0kb downstream 13847 true Bd1: 373644-387490 Brachypodium distachyon
Bradi1g00450 10.0kb downstream 10.0kb downstream 10000 false Bd1: 373644-383643 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572838 5269 Grass View MSA
122046428 5273 Angiosperm View MSA
121350403 5274 Embryophyte View MSA
123428253 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.055        
cufflinks 5.343        
cufflinks 6.226        
cufflinks 5.772        
cufflinks 4.209        
cufflinks 5.11        
cufflinks 4.335        
cufflinks 4.305        
cufflinks 5.295        
cufflinks 4.768        
cufflinks 4.591        
cufflinks 5.503        
cufflinks 3.707        
cufflinks 3.755        
cufflinks 4.96        
cufflinks 4.795        
cufflinks 4.642        
cufflinks 8.908       High
cufflinks 4.637        
cufflinks 2.106       Low
cufflinks 5.573        
cufflinks 5.837        
cufflinks 4.29        
cufflinks 4.869        
cufflinks 4.184        
cufflinks 6.583        
cufflinks 5.326        
cufflinks 6.586        
cufflinks 5.494        
cufflinks 6.785       High

0 Strain