Gene : Bradi1g00867 B. distachyon v3.1
Defline:  (1 of 1) PTHR13691//PTHR13691:SF18 - RIBOSOMAL PROTEIN L2 Genomic Order:  95
Name:  ? Bradi1g00867 Secondary Identifier:  ? PAC:32801127
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g00867 0.5kb upstream 0.5kb upstream 1758 true Bd1: 617640-619397 Brachypodium distachyon
Bradi1g00867 0.5kb upstream 0.5kb upstream 500 false Bd1: 617640-618139 Brachypodium distachyon
Bradi1g00867 0.5kb downstream 0.5kb downstream 1758 true Bd1: 618140-619897 Brachypodium distachyon
Bradi1g00867 0.5kb downstream 0.5kb downstream 500 false Bd1: 619398-619897 Brachypodium distachyon
Bradi1g00867 1.0kb upstream 1.0kb upstream 2258 true Bd1: 617140-619397 Brachypodium distachyon
Bradi1g00867 1.0kb upstream 1.0kb upstream 1000 false Bd1: 617140-618139 Brachypodium distachyon
Bradi1g00867 1.0kb downstream 1.0kb downstream 2258 true Bd1: 618140-620397 Brachypodium distachyon
Bradi1g00867 1.0kb downstream 1.0kb downstream 1000 false Bd1: 619398-620397 Brachypodium distachyon
Bradi1g00867 2.0kb upstream 2.0kb upstream 3258 true Bd1: 616140-619397 Brachypodium distachyon
Bradi1g00867 2.0kb upstream 2.0kb upstream 2000 false Bd1: 616140-618139 Brachypodium distachyon
Bradi1g00867 2.0kb downstream 2.0kb downstream 3258 true Bd1: 618140-621397 Brachypodium distachyon
Bradi1g00867 2.0kb downstream 2.0kb downstream 2000 false Bd1: 619398-621397 Brachypodium distachyon
Bradi1g00867 5.0kb upstream 5.0kb upstream 6258 true Bd1: 613140-619397 Brachypodium distachyon
Bradi1g00867 5.0kb upstream 5.0kb upstream 5000 false Bd1: 613140-618139 Brachypodium distachyon
Bradi1g00867 5.0kb downstream 5.0kb downstream 6258 true Bd1: 618140-624397 Brachypodium distachyon
Bradi1g00867 5.0kb downstream 5.0kb downstream 5000 false Bd1: 619398-624397 Brachypodium distachyon
Bradi1g00867 10.0kb upstream 10.0kb upstream 11258 true Bd1: 608140-619397 Brachypodium distachyon
Bradi1g00867 10.0kb upstream 10.0kb upstream 10000 false Bd1: 608140-618139 Brachypodium distachyon
Bradi1g00867 10.0kb downstream 10.0kb downstream 11258 true Bd1: 618140-629397 Brachypodium distachyon
Bradi1g00867 10.0kb downstream 10.0kb downstream 10000 false Bd1: 619398-629397 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031176 5273 Angiosperm View MSA
124583761 5269 Grass View MSA
121300265 5274 Embryophyte View MSA
123338055 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low Low
cufflinks 0.014     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.056     Low  
cufflinks 0.055     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.074     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain