Gene : Bradi1g03800 B. distachyon v3.1
Defline:  (1 of 12) PTHR10953 - UBIQUITIN-ACTIVATING ENZYME E1 Genomic Order:  471
Name:  ? Bradi1g03800 Secondary Identifier:  ? PAC:32806357
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g03800 0.5kb upstream 0.5kb upstream 7828 true Bd1: 2545480-2553307 Brachypodium distachyon
Bradi1g03800 0.5kb upstream 0.5kb upstream 500 false Bd1: 2552808-2553307 Brachypodium distachyon
Bradi1g03800 0.5kb downstream 0.5kb downstream 7828 true Bd1: 2544980-2552807 Brachypodium distachyon
Bradi1g03800 0.5kb downstream 0.5kb downstream 500 false Bd1: 2544980-2545479 Brachypodium distachyon
Bradi1g03800 1.0kb upstream 1.0kb upstream 8328 true Bd1: 2545480-2553807 Brachypodium distachyon
Bradi1g03800 1.0kb upstream 1.0kb upstream 1000 false Bd1: 2552808-2553807 Brachypodium distachyon
Bradi1g03800 1.0kb downstream 1.0kb downstream 8328 true Bd1: 2544480-2552807 Brachypodium distachyon
Bradi1g03800 1.0kb downstream 1.0kb downstream 1000 false Bd1: 2544480-2545479 Brachypodium distachyon
Bradi1g03800 2.0kb upstream 2.0kb upstream 9328 true Bd1: 2545480-2554807 Brachypodium distachyon
Bradi1g03800 2.0kb upstream 2.0kb upstream 2000 false Bd1: 2552808-2554807 Brachypodium distachyon
Bradi1g03800 2.0kb downstream 2.0kb downstream 9328 true Bd1: 2543480-2552807 Brachypodium distachyon
Bradi1g03800 2.0kb downstream 2.0kb downstream 2000 false Bd1: 2543480-2545479 Brachypodium distachyon
Bradi1g03800 5.0kb upstream 5.0kb upstream 12328 true Bd1: 2545480-2557807 Brachypodium distachyon
Bradi1g03800 5.0kb upstream 5.0kb upstream 5000 false Bd1: 2552808-2557807 Brachypodium distachyon
Bradi1g03800 5.0kb downstream 5.0kb downstream 12328 true Bd1: 2540480-2552807 Brachypodium distachyon
Bradi1g03800 5.0kb downstream 5.0kb downstream 5000 false Bd1: 2540480-2545479 Brachypodium distachyon
Bradi1g03800 10.0kb upstream 10.0kb upstream 17328 true Bd1: 2545480-2562807 Brachypodium distachyon
Bradi1g03800 10.0kb upstream 10.0kb upstream 10000 false Bd1: 2552808-2562807 Brachypodium distachyon
Bradi1g03800 10.0kb downstream 10.0kb downstream 17328 true Bd1: 2535480-2552807 Brachypodium distachyon
Bradi1g03800 10.0kb downstream 10.0kb downstream 10000 false Bd1: 2535480-2545479 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041299 5273 Angiosperm View MSA
124577740 5269 Grass View MSA
121347842 5274 Embryophyte View MSA
123426326 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.153       Low
cufflinks 2.086        
cufflinks 1.875        
cufflinks 2.018        
cufflinks 1.261       Low
cufflinks 1.824        
cufflinks 1.866        
cufflinks 1.573        
cufflinks 1.739        
cufflinks 1.306        
cufflinks 1.758        
cufflinks 1.676        
cufflinks 1.508        
cufflinks 1.48        
cufflinks 1.451        
cufflinks 1.816        
cufflinks 1.812        
cufflinks 2.801       High
cufflinks 2.206       High
cufflinks 1.063       Low
cufflinks 2.291       High
cufflinks 1.687        
cufflinks 1.617        
cufflinks 1.675        
cufflinks 1.77        
cufflinks 1.792        
cufflinks 1.623        
cufflinks 1.687        
cufflinks 1.607        
cufflinks 2.01        

0 Strain