Gene : Bradi1g03940 B. distachyon v3.1
Defline:  (1 of 1) PTHR32285:SF21 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 32 Genomic Order:  488
Name:  ? Bradi1g03940 Secondary Identifier:  ? PAC:32803457
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g03940 0.5kb upstream 0.5kb upstream 5727 true Bd1: 2640964-2646690 Brachypodium distachyon
Bradi1g03940 0.5kb upstream 0.5kb upstream 500 false Bd1: 2640964-2641463 Brachypodium distachyon
Bradi1g03940 0.5kb downstream 0.5kb downstream 5727 true Bd1: 2641464-2647190 Brachypodium distachyon
Bradi1g03940 0.5kb downstream 0.5kb downstream 500 false Bd1: 2646691-2647190 Brachypodium distachyon
Bradi1g03940 1.0kb upstream 1.0kb upstream 6227 true Bd1: 2640464-2646690 Brachypodium distachyon
Bradi1g03940 1.0kb upstream 1.0kb upstream 1000 false Bd1: 2640464-2641463 Brachypodium distachyon
Bradi1g03940 1.0kb downstream 1.0kb downstream 6227 true Bd1: 2641464-2647690 Brachypodium distachyon
Bradi1g03940 1.0kb downstream 1.0kb downstream 1000 false Bd1: 2646691-2647690 Brachypodium distachyon
Bradi1g03940 2.0kb upstream 2.0kb upstream 7227 true Bd1: 2639464-2646690 Brachypodium distachyon
Bradi1g03940 2.0kb upstream 2.0kb upstream 2000 false Bd1: 2639464-2641463 Brachypodium distachyon
Bradi1g03940 2.0kb downstream 2.0kb downstream 7227 true Bd1: 2641464-2648690 Brachypodium distachyon
Bradi1g03940 2.0kb downstream 2.0kb downstream 2000 false Bd1: 2646691-2648690 Brachypodium distachyon
Bradi1g03940 5.0kb upstream 5.0kb upstream 10227 true Bd1: 2636464-2646690 Brachypodium distachyon
Bradi1g03940 5.0kb upstream 5.0kb upstream 5000 false Bd1: 2636464-2641463 Brachypodium distachyon
Bradi1g03940 5.0kb downstream 5.0kb downstream 10227 true Bd1: 2641464-2651690 Brachypodium distachyon
Bradi1g03940 5.0kb downstream 5.0kb downstream 5000 false Bd1: 2646691-2651690 Brachypodium distachyon
Bradi1g03940 10.0kb upstream 10.0kb upstream 15227 true Bd1: 2631464-2646690 Brachypodium distachyon
Bradi1g03940 10.0kb upstream 10.0kb upstream 10000 false Bd1: 2631464-2641463 Brachypodium distachyon
Bradi1g03940 10.0kb downstream 10.0kb downstream 15227 true Bd1: 2641464-2656690 Brachypodium distachyon
Bradi1g03940 10.0kb downstream 10.0kb downstream 10000 false Bd1: 2646691-2656690 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575217 5269 Grass View MSA
122044397 5273 Angiosperm View MSA
121310289 5274 Embryophyte View MSA
123347816 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.502        
cufflinks 1.91        
cufflinks 2.035        
cufflinks 2.234        
cufflinks 4.166        
cufflinks 1.827        
cufflinks 1.878        
cufflinks 4.407        
cufflinks 2.958        
cufflinks 2.898        
cufflinks 0.447       Low
cufflinks 2.687        
cufflinks 1.143       Low
cufflinks 1.075       Low
cufflinks 4.466        
cufflinks 1.96        
cufflinks 3.444        
cufflinks 6.181       High
cufflinks 1.868        
cufflinks 1.685        
cufflinks 13.207     High High
cufflinks 3.571        
cufflinks 4.826        
cufflinks 3.38        
cufflinks 2.215        
cufflinks 2.209        
cufflinks 1.286        
cufflinks 2.102        
cufflinks 2.908        
cufflinks 6.292       High

0 Strain