Gene : Bradi1g04460 B. distachyon v3.1
Defline:  (1 of 2) PTHR23306 - TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED Genomic Order:  561
Name:  ? Bradi1g04460 Secondary Identifier:  ? PAC:32792663
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g04460 0.5kb upstream 0.5kb upstream 1595 true Bd1: 3001051-3002645 Brachypodium distachyon
Bradi1g04460 0.5kb upstream 0.5kb upstream 500 false Bd1: 3002146-3002645 Brachypodium distachyon
Bradi1g04460 0.5kb downstream 0.5kb downstream 1595 true Bd1: 3000551-3002145 Brachypodium distachyon
Bradi1g04460 0.5kb downstream 0.5kb downstream 500 false Bd1: 3000551-3001050 Brachypodium distachyon
Bradi1g04460 1.0kb upstream 1.0kb upstream 2095 true Bd1: 3001051-3003145 Brachypodium distachyon
Bradi1g04460 1.0kb upstream 1.0kb upstream 1000 false Bd1: 3002146-3003145 Brachypodium distachyon
Bradi1g04460 1.0kb downstream 1.0kb downstream 2095 true Bd1: 3000051-3002145 Brachypodium distachyon
Bradi1g04460 1.0kb downstream 1.0kb downstream 1000 false Bd1: 3000051-3001050 Brachypodium distachyon
Bradi1g04460 2.0kb upstream 2.0kb upstream 3095 true Bd1: 3001051-3004145 Brachypodium distachyon
Bradi1g04460 2.0kb upstream 2.0kb upstream 2000 false Bd1: 3002146-3004145 Brachypodium distachyon
Bradi1g04460 2.0kb downstream 2.0kb downstream 3095 true Bd1: 2999051-3002145 Brachypodium distachyon
Bradi1g04460 2.0kb downstream 2.0kb downstream 2000 false Bd1: 2999051-3001050 Brachypodium distachyon
Bradi1g04460 5.0kb upstream 5.0kb upstream 6095 true Bd1: 3001051-3007145 Brachypodium distachyon
Bradi1g04460 5.0kb upstream 5.0kb upstream 5000 false Bd1: 3002146-3007145 Brachypodium distachyon
Bradi1g04460 5.0kb downstream 5.0kb downstream 6095 true Bd1: 2996051-3002145 Brachypodium distachyon
Bradi1g04460 5.0kb downstream 5.0kb downstream 5000 false Bd1: 2996051-3001050 Brachypodium distachyon
Bradi1g04460 10.0kb upstream 10.0kb upstream 11095 true Bd1: 3001051-3012145 Brachypodium distachyon
Bradi1g04460 10.0kb upstream 10.0kb upstream 10000 false Bd1: 3002146-3012145 Brachypodium distachyon
Bradi1g04460 10.0kb downstream 10.0kb downstream 11095 true Bd1: 2991051-3002145 Brachypodium distachyon
Bradi1g04460 10.0kb downstream 10.0kb downstream 10000 false Bd1: 2991051-3001050 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589689 5269 Grass View MSA
122050424 5273 Angiosperm View MSA
121347695 5274 Embryophyte View MSA
123427966 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.731        
cufflinks 0.203        
cufflinks 0.218        
cufflinks 0.1       Low
cufflinks 0.479        
cufflinks 0.134       Low
cufflinks 0.22        
cufflinks 0.336        
cufflinks 0.161        
cufflinks 0.386        
cufflinks 0.47        
cufflinks 0.317        
cufflinks 0.406        
cufflinks 0.538        
cufflinks 0.659        
cufflinks 0.204        
cufflinks 0.178        
cufflinks 0.129     Low Low
cufflinks 4.123       High
cufflinks 2.644       High
cufflinks 0.144       Low
cufflinks 0.141       Low
cufflinks 0.354        
cufflinks 0.413        
cufflinks 0.317        
cufflinks 0.244        
cufflinks 0.64        
cufflinks 0.288        
cufflinks 0.599        
cufflinks 0.047     Low Low

0 Strain