Gene : Bradi1g05070 B. distachyon v3.1
Defline:  (1 of 4) PF07524 - Bromodomain associated (Bromo_TP) Genomic Order:  636
Name:  ? Bradi1g05070 Secondary Identifier:  ? PAC:32800409
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g05070 0.5kb upstream 0.5kb upstream 4876 true Bd1: 3374784-3379659 Brachypodium distachyon
Bradi1g05070 0.5kb upstream 0.5kb upstream 500 false Bd1: 3374784-3375283 Brachypodium distachyon
Bradi1g05070 0.5kb downstream 0.5kb downstream 4876 true Bd1: 3375284-3380159 Brachypodium distachyon
Bradi1g05070 0.5kb downstream 0.5kb downstream 500 false Bd1: 3379660-3380159 Brachypodium distachyon
Bradi1g05070 1.0kb upstream 1.0kb upstream 5376 true Bd1: 3374284-3379659 Brachypodium distachyon
Bradi1g05070 1.0kb upstream 1.0kb upstream 1000 false Bd1: 3374284-3375283 Brachypodium distachyon
Bradi1g05070 1.0kb downstream 1.0kb downstream 5376 true Bd1: 3375284-3380659 Brachypodium distachyon
Bradi1g05070 1.0kb downstream 1.0kb downstream 1000 false Bd1: 3379660-3380659 Brachypodium distachyon
Bradi1g05070 2.0kb upstream 2.0kb upstream 6376 true Bd1: 3373284-3379659 Brachypodium distachyon
Bradi1g05070 2.0kb upstream 2.0kb upstream 2000 false Bd1: 3373284-3375283 Brachypodium distachyon
Bradi1g05070 2.0kb downstream 2.0kb downstream 6376 true Bd1: 3375284-3381659 Brachypodium distachyon
Bradi1g05070 2.0kb downstream 2.0kb downstream 2000 false Bd1: 3379660-3381659 Brachypodium distachyon
Bradi1g05070 5.0kb upstream 5.0kb upstream 9376 true Bd1: 3370284-3379659 Brachypodium distachyon
Bradi1g05070 5.0kb upstream 5.0kb upstream 5000 false Bd1: 3370284-3375283 Brachypodium distachyon
Bradi1g05070 5.0kb downstream 5.0kb downstream 9376 true Bd1: 3375284-3384659 Brachypodium distachyon
Bradi1g05070 5.0kb downstream 5.0kb downstream 5000 false Bd1: 3379660-3384659 Brachypodium distachyon
Bradi1g05070 10.0kb upstream 10.0kb upstream 14376 true Bd1: 3365284-3379659 Brachypodium distachyon
Bradi1g05070 10.0kb upstream 10.0kb upstream 10000 false Bd1: 3365284-3375283 Brachypodium distachyon
Bradi1g05070 10.0kb downstream 10.0kb downstream 14376 true Bd1: 3375284-3389659 Brachypodium distachyon
Bradi1g05070 10.0kb downstream 10.0kb downstream 10000 false Bd1: 3379660-3389659 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026333 5273 Angiosperm View MSA
124582739 5269 Grass View MSA
121346710 5274 Embryophyte View MSA
123380433 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.449        
cufflinks 2.835        
cufflinks 4.834       High
cufflinks 2.212        
cufflinks 1.642       Low
cufflinks 2.963        
cufflinks 2.837        
cufflinks 3.298        
cufflinks 3.038        
cufflinks 3.397        
cufflinks 4.664       High
cufflinks 3.063        
cufflinks 3.282        
cufflinks 3.408        
cufflinks 1.683       Low
cufflinks 3.064        
cufflinks 2.0        
cufflinks 4.246        
cufflinks 4.102        
cufflinks 1.639       Low
cufflinks 2.529        
cufflinks 5.048       High
cufflinks 3.101        
cufflinks 2.597        
cufflinks 2.293        
cufflinks 4.493       High
cufflinks 4.834       High
cufflinks 4.715       High
cufflinks 4.577       High
cufflinks 2.832        

0 Strain