Gene : Bradi1g05240 B. distachyon v3.1
Defline:  (1 of 1) PTHR11702//PTHR11702:SF3 - DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED // GTP-BINDING PROTEIN 10 Genomic Order:  660
Name:  ? Bradi1g05240 Secondary Identifier:  ? PAC:32806683
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g05240 0.5kb upstream 0.5kb upstream 6033 true Bd1: 3544008-3550040 Brachypodium distachyon
Bradi1g05240 0.5kb upstream 0.5kb upstream 500 false Bd1: 3549541-3550040 Brachypodium distachyon
Bradi1g05240 0.5kb downstream 0.5kb downstream 6033 true Bd1: 3543508-3549540 Brachypodium distachyon
Bradi1g05240 0.5kb downstream 0.5kb downstream 500 false Bd1: 3543508-3544007 Brachypodium distachyon
Bradi1g05240 1.0kb upstream 1.0kb upstream 6533 true Bd1: 3544008-3550540 Brachypodium distachyon
Bradi1g05240 1.0kb upstream 1.0kb upstream 1000 false Bd1: 3549541-3550540 Brachypodium distachyon
Bradi1g05240 1.0kb downstream 1.0kb downstream 6533 true Bd1: 3543008-3549540 Brachypodium distachyon
Bradi1g05240 1.0kb downstream 1.0kb downstream 1000 false Bd1: 3543008-3544007 Brachypodium distachyon
Bradi1g05240 2.0kb upstream 2.0kb upstream 7533 true Bd1: 3544008-3551540 Brachypodium distachyon
Bradi1g05240 2.0kb upstream 2.0kb upstream 2000 false Bd1: 3549541-3551540 Brachypodium distachyon
Bradi1g05240 2.0kb downstream 2.0kb downstream 7533 true Bd1: 3542008-3549540 Brachypodium distachyon
Bradi1g05240 2.0kb downstream 2.0kb downstream 2000 false Bd1: 3542008-3544007 Brachypodium distachyon
Bradi1g05240 5.0kb upstream 5.0kb upstream 10533 true Bd1: 3544008-3554540 Brachypodium distachyon
Bradi1g05240 5.0kb upstream 5.0kb upstream 5000 false Bd1: 3549541-3554540 Brachypodium distachyon
Bradi1g05240 5.0kb downstream 5.0kb downstream 10533 true Bd1: 3539008-3549540 Brachypodium distachyon
Bradi1g05240 5.0kb downstream 5.0kb downstream 5000 false Bd1: 3539008-3544007 Brachypodium distachyon
Bradi1g05240 10.0kb upstream 10.0kb upstream 15533 true Bd1: 3544008-3559540 Brachypodium distachyon
Bradi1g05240 10.0kb upstream 10.0kb upstream 10000 false Bd1: 3549541-3559540 Brachypodium distachyon
Bradi1g05240 10.0kb downstream 10.0kb downstream 15533 true Bd1: 3534008-3549540 Brachypodium distachyon
Bradi1g05240 10.0kb downstream 10.0kb downstream 10000 false Bd1: 3534008-3544007 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576840 5269 Grass View MSA
122048134 5273 Angiosperm View MSA
121348183 5274 Embryophyte View MSA
123428506 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.562     High  
cufflinks 35.24     High High
cufflinks 35.447     High High
cufflinks 33.557     High  
cufflinks 10.551     High  
cufflinks 24.49     High  
cufflinks 31.144     High  
cufflinks 19.179     High  
cufflinks 19.662     High  
cufflinks 18.616     High  
cufflinks 29.105     High  
cufflinks 19.764     High  
cufflinks 16.338     High  
cufflinks 22.807     High  
cufflinks 17.238     High  
cufflinks 27.539     High  
cufflinks 19.821     High  
cufflinks 2.765       Low
cufflinks 19.451     High  
cufflinks 2.663       Low
cufflinks 11.155     High  
cufflinks 24.038     High  
cufflinks 18.146     High  
cufflinks 20.311     High  
cufflinks 24.398     High  
cufflinks 30.705     High  
cufflinks 14.04     High  
cufflinks 27.056     High  
cufflinks 26.157     High  
cufflinks 18.367     High  

0 Strain