Gene : Bradi1g05360 B. distachyon v3.1
Defline:  (1 of 2) PTHR13264 - GCIP-INTERACTING PROTEIN P29 Genomic Order:  677
Name:  ? Bradi1g05360 Secondary Identifier:  ? PAC:32799932
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g05360 0.5kb upstream 0.5kb upstream 3337 true Bd1: 3637930-3641266 Brachypodium distachyon
Bradi1g05360 0.5kb upstream 0.5kb upstream 500 false Bd1: 3640767-3641266 Brachypodium distachyon
Bradi1g05360 0.5kb downstream 0.5kb downstream 3337 true Bd1: 3637430-3640766 Brachypodium distachyon
Bradi1g05360 0.5kb downstream 0.5kb downstream 500 false Bd1: 3637430-3637929 Brachypodium distachyon
Bradi1g05360 1.0kb upstream 1.0kb upstream 3837 true Bd1: 3637930-3641766 Brachypodium distachyon
Bradi1g05360 1.0kb upstream 1.0kb upstream 1000 false Bd1: 3640767-3641766 Brachypodium distachyon
Bradi1g05360 1.0kb downstream 1.0kb downstream 3837 true Bd1: 3636930-3640766 Brachypodium distachyon
Bradi1g05360 1.0kb downstream 1.0kb downstream 1000 false Bd1: 3636930-3637929 Brachypodium distachyon
Bradi1g05360 2.0kb upstream 2.0kb upstream 4837 true Bd1: 3637930-3642766 Brachypodium distachyon
Bradi1g05360 2.0kb upstream 2.0kb upstream 2000 false Bd1: 3640767-3642766 Brachypodium distachyon
Bradi1g05360 2.0kb downstream 2.0kb downstream 4837 true Bd1: 3635930-3640766 Brachypodium distachyon
Bradi1g05360 2.0kb downstream 2.0kb downstream 2000 false Bd1: 3635930-3637929 Brachypodium distachyon
Bradi1g05360 5.0kb upstream 5.0kb upstream 7837 true Bd1: 3637930-3645766 Brachypodium distachyon
Bradi1g05360 5.0kb upstream 5.0kb upstream 5000 false Bd1: 3640767-3645766 Brachypodium distachyon
Bradi1g05360 5.0kb downstream 5.0kb downstream 7837 true Bd1: 3632930-3640766 Brachypodium distachyon
Bradi1g05360 5.0kb downstream 5.0kb downstream 5000 false Bd1: 3632930-3637929 Brachypodium distachyon
Bradi1g05360 10.0kb upstream 10.0kb upstream 12837 true Bd1: 3637930-3650766 Brachypodium distachyon
Bradi1g05360 10.0kb upstream 10.0kb upstream 10000 false Bd1: 3640767-3650766 Brachypodium distachyon
Bradi1g05360 10.0kb downstream 10.0kb downstream 12837 true Bd1: 3627930-3640766 Brachypodium distachyon
Bradi1g05360 10.0kb downstream 10.0kb downstream 10000 false Bd1: 3627930-3637929 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583145 5269 Grass View MSA
122049804 5273 Angiosperm View MSA
121347073 5274 Embryophyte View MSA
123424870 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.691        
cufflinks 2.437        
cufflinks 3.469        
cufflinks 2.095       Low
cufflinks 3.171        
cufflinks 2.263        
cufflinks 2.406        
cufflinks 2.334        
cufflinks 2.081       Low
cufflinks 3.532        
cufflinks 3.81        
cufflinks 2.488        
cufflinks 2.113       Low
cufflinks 2.371        
cufflinks 2.587        
cufflinks 2.701        
cufflinks 2.739        
cufflinks 4.426       High
cufflinks 5.271       High
cufflinks 6.149       High
cufflinks 3.124        
cufflinks 3.361        
cufflinks 2.417        
cufflinks 2.029       Low
cufflinks 2.131       Low
cufflinks 3.411        
cufflinks 2.856        
cufflinks 3.602        
cufflinks 2.849        
cufflinks 2.933        

0 Strain