Gene : Bradi1g05480 B. distachyon v3.1
Defline:  (1 of 1) PTHR22952//PTHR22952:SF90 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // BASIC LEUCINE ZIPPER 63 Genomic Order:  688
Name:  ? Bradi1g05480 Secondary Identifier:  ? PAC:32799151
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g05480 0.5kb upstream 0.5kb upstream 5447 true Bd1: 3717109-3722555 Brachypodium distachyon
Bradi1g05480 0.5kb upstream 0.5kb upstream 500 false Bd1: 3717109-3717608 Brachypodium distachyon
Bradi1g05480 0.5kb downstream 0.5kb downstream 5447 true Bd1: 3717609-3723055 Brachypodium distachyon
Bradi1g05480 0.5kb downstream 0.5kb downstream 500 false Bd1: 3722556-3723055 Brachypodium distachyon
Bradi1g05480 1.0kb upstream 1.0kb upstream 5947 true Bd1: 3716609-3722555 Brachypodium distachyon
Bradi1g05480 1.0kb upstream 1.0kb upstream 1000 false Bd1: 3716609-3717608 Brachypodium distachyon
Bradi1g05480 1.0kb downstream 1.0kb downstream 5947 true Bd1: 3717609-3723555 Brachypodium distachyon
Bradi1g05480 1.0kb downstream 1.0kb downstream 1000 false Bd1: 3722556-3723555 Brachypodium distachyon
Bradi1g05480 2.0kb upstream 2.0kb upstream 6947 true Bd1: 3715609-3722555 Brachypodium distachyon
Bradi1g05480 2.0kb upstream 2.0kb upstream 2000 false Bd1: 3715609-3717608 Brachypodium distachyon
Bradi1g05480 2.0kb downstream 2.0kb downstream 6947 true Bd1: 3717609-3724555 Brachypodium distachyon
Bradi1g05480 2.0kb downstream 2.0kb downstream 2000 false Bd1: 3722556-3724555 Brachypodium distachyon
Bradi1g05480 5.0kb upstream 5.0kb upstream 9947 true Bd1: 3712609-3722555 Brachypodium distachyon
Bradi1g05480 5.0kb upstream 5.0kb upstream 5000 false Bd1: 3712609-3717608 Brachypodium distachyon
Bradi1g05480 5.0kb downstream 5.0kb downstream 9947 true Bd1: 3717609-3727555 Brachypodium distachyon
Bradi1g05480 5.0kb downstream 5.0kb downstream 5000 false Bd1: 3722556-3727555 Brachypodium distachyon
Bradi1g05480 10.0kb upstream 10.0kb upstream 14947 true Bd1: 3707609-3722555 Brachypodium distachyon
Bradi1g05480 10.0kb upstream 10.0kb upstream 10000 false Bd1: 3707609-3717608 Brachypodium distachyon
Bradi1g05480 10.0kb downstream 10.0kb downstream 14947 true Bd1: 3717609-3732555 Brachypodium distachyon
Bradi1g05480 10.0kb downstream 10.0kb downstream 10000 false Bd1: 3722556-3732555 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586675 5269 Grass View MSA
122051376 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121350237 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.596       Low
cufflinks 7.782       Low
cufflinks 34.264     High High
cufflinks 7.806       Low
cufflinks 23.513     High  
cufflinks 9.069        
cufflinks 8.931        
cufflinks 10.935     High  
cufflinks 7.834       Low
cufflinks 44.427     High High
cufflinks 80.112     High High
cufflinks 8.908        
cufflinks 27.352     High  
cufflinks 37.592     High High
cufflinks 16.37     High  
cufflinks 20.2     High  
cufflinks 11.617     High  
cufflinks 12.729     High  
cufflinks 19.131     High  
cufflinks 48.461     High High
cufflinks 6.094       Low
cufflinks 33.769     High High
cufflinks 9.657     High  
cufflinks 6.979       Low
cufflinks 7.231       Low
cufflinks 31.797     High  
cufflinks 17.387     High  
cufflinks 36.351     High High
cufflinks 27.201     High  
cufflinks 5.335       Low

0 Strain