Gene : Bradi1g05749 B. distachyon v3.1
Defline:  (1 of 4) PTHR15238:SF3 - 50S RIBOSOMAL PROTEIN L33, CHLOROPLASTIC Genomic Order:  727
Name:  ? Bradi1g05749 Secondary Identifier:  ? PAC:32806501
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g05749 0.5kb upstream 0.5kb upstream 701 true Bd1: 3904712-3905412 Brachypodium distachyon
Bradi1g05749 0.5kb upstream 0.5kb upstream 500 false Bd1: 3904913-3905412 Brachypodium distachyon
Bradi1g05749 0.5kb downstream 0.5kb downstream 701 true Bd1: 3904212-3904912 Brachypodium distachyon
Bradi1g05749 0.5kb downstream 0.5kb downstream 500 false Bd1: 3904212-3904711 Brachypodium distachyon
Bradi1g05749 1.0kb upstream 1.0kb upstream 1201 true Bd1: 3904712-3905912 Brachypodium distachyon
Bradi1g05749 1.0kb upstream 1.0kb upstream 1000 false Bd1: 3904913-3905912 Brachypodium distachyon
Bradi1g05749 1.0kb downstream 1.0kb downstream 1201 true Bd1: 3903712-3904912 Brachypodium distachyon
Bradi1g05749 1.0kb downstream 1.0kb downstream 1000 false Bd1: 3903712-3904711 Brachypodium distachyon
Bradi1g05749 2.0kb upstream 2.0kb upstream 2201 true Bd1: 3904712-3906912 Brachypodium distachyon
Bradi1g05749 2.0kb upstream 2.0kb upstream 2000 false Bd1: 3904913-3906912 Brachypodium distachyon
Bradi1g05749 2.0kb downstream 2.0kb downstream 2201 true Bd1: 3902712-3904912 Brachypodium distachyon
Bradi1g05749 2.0kb downstream 2.0kb downstream 2000 false Bd1: 3902712-3904711 Brachypodium distachyon
Bradi1g05749 5.0kb upstream 5.0kb upstream 5201 true Bd1: 3904712-3909912 Brachypodium distachyon
Bradi1g05749 5.0kb upstream 5.0kb upstream 5000 false Bd1: 3904913-3909912 Brachypodium distachyon
Bradi1g05749 5.0kb downstream 5.0kb downstream 5201 true Bd1: 3899712-3904912 Brachypodium distachyon
Bradi1g05749 5.0kb downstream 5.0kb downstream 5000 false Bd1: 3899712-3904711 Brachypodium distachyon
Bradi1g05749 10.0kb upstream 10.0kb upstream 10201 true Bd1: 3904712-3914912 Brachypodium distachyon
Bradi1g05749 10.0kb upstream 10.0kb upstream 10000 false Bd1: 3904913-3914912 Brachypodium distachyon
Bradi1g05749 10.0kb downstream 10.0kb downstream 10201 true Bd1: 3894712-3904912 Brachypodium distachyon
Bradi1g05749 10.0kb downstream 10.0kb downstream 10000 false Bd1: 3894712-3904711 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029878 5273 Angiosperm View MSA
124592319 5269 Grass View MSA
121299138 5274 Embryophyte View MSA
123428185 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.1        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.083        
cufflinks 0.089        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain