Gene : Bradi1g05790 B. distachyon v3.1
Defline:  (1 of 2) KOG4665 - ATP synthase F0 subunit 6 and related proteins Genomic Order:  742
Name:  ? Bradi1g05790 Secondary Identifier:  ? PAC:32796043
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-7219 Brachypodium distachyon pathologic  
Bdistachyon PWY-7229 Brachypodium distachyon pathologic  
Bdistachyon PWY-841 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g05790 0.5kb upstream 0.5kb upstream 1193 true Bd1: 3920732-3921924 Brachypodium distachyon
Bradi1g05790 0.5kb upstream 0.5kb upstream 500 false Bd1: 3920732-3921231 Brachypodium distachyon
Bradi1g05790 0.5kb downstream 0.5kb downstream 1193 true Bd1: 3921232-3922424 Brachypodium distachyon
Bradi1g05790 0.5kb downstream 0.5kb downstream 500 false Bd1: 3921925-3922424 Brachypodium distachyon
Bradi1g05790 1.0kb upstream 1.0kb upstream 1693 true Bd1: 3920232-3921924 Brachypodium distachyon
Bradi1g05790 1.0kb upstream 1.0kb upstream 1000 false Bd1: 3920232-3921231 Brachypodium distachyon
Bradi1g05790 1.0kb downstream 1.0kb downstream 1693 true Bd1: 3921232-3922924 Brachypodium distachyon
Bradi1g05790 1.0kb downstream 1.0kb downstream 1000 false Bd1: 3921925-3922924 Brachypodium distachyon
Bradi1g05790 2.0kb upstream 2.0kb upstream 2693 true Bd1: 3919232-3921924 Brachypodium distachyon
Bradi1g05790 2.0kb upstream 2.0kb upstream 2000 false Bd1: 3919232-3921231 Brachypodium distachyon
Bradi1g05790 2.0kb downstream 2.0kb downstream 2693 true Bd1: 3921232-3923924 Brachypodium distachyon
Bradi1g05790 2.0kb downstream 2.0kb downstream 2000 false Bd1: 3921925-3923924 Brachypodium distachyon
Bradi1g05790 5.0kb upstream 5.0kb upstream 5693 true Bd1: 3916232-3921924 Brachypodium distachyon
Bradi1g05790 5.0kb upstream 5.0kb upstream 5000 false Bd1: 3916232-3921231 Brachypodium distachyon
Bradi1g05790 5.0kb downstream 5.0kb downstream 5693 true Bd1: 3921232-3926924 Brachypodium distachyon
Bradi1g05790 5.0kb downstream 5.0kb downstream 5000 false Bd1: 3921925-3926924 Brachypodium distachyon
Bradi1g05790 10.0kb upstream 10.0kb upstream 10693 true Bd1: 3911232-3921924 Brachypodium distachyon
Bradi1g05790 10.0kb upstream 10.0kb upstream 10000 false Bd1: 3911232-3921231 Brachypodium distachyon
Bradi1g05790 10.0kb downstream 10.0kb downstream 10693 true Bd1: 3921232-3931924 Brachypodium distachyon
Bradi1g05790 10.0kb downstream 10.0kb downstream 10000 false Bd1: 3921925-3931924 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029216 5273 Angiosperm View MSA
124584923 5269 Grass View MSA
121348660 5274 Embryophyte View MSA
123428637 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain