Gene : Bradi1g05805 B. distachyon v3.1
Defline:  (1 of 1) PF01701//PF02529 - Photosystem I reaction centre subunit IX / PsaJ (PSI_PsaJ) // Cytochrome B6-F complex subunit 5 (PetG) Genomic Order:  734
Name:  ? Bradi1g05805 Secondary Identifier:  ? PAC:32791767
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g05805 0.5kb upstream 0.5kb upstream 1490 true Bd1: 3912940-3914429 Brachypodium distachyon
Bradi1g05805 0.5kb upstream 0.5kb upstream 500 false Bd1: 3913930-3914429 Brachypodium distachyon
Bradi1g05805 0.5kb downstream 0.5kb downstream 1490 true Bd1: 3912440-3913929 Brachypodium distachyon
Bradi1g05805 0.5kb downstream 0.5kb downstream 500 false Bd1: 3912440-3912939 Brachypodium distachyon
Bradi1g05805 1.0kb upstream 1.0kb upstream 1990 true Bd1: 3912940-3914929 Brachypodium distachyon
Bradi1g05805 1.0kb upstream 1.0kb upstream 1000 false Bd1: 3913930-3914929 Brachypodium distachyon
Bradi1g05805 1.0kb downstream 1.0kb downstream 1990 true Bd1: 3911940-3913929 Brachypodium distachyon
Bradi1g05805 1.0kb downstream 1.0kb downstream 1000 false Bd1: 3911940-3912939 Brachypodium distachyon
Bradi1g05805 2.0kb upstream 2.0kb upstream 2990 true Bd1: 3912940-3915929 Brachypodium distachyon
Bradi1g05805 2.0kb upstream 2.0kb upstream 2000 false Bd1: 3913930-3915929 Brachypodium distachyon
Bradi1g05805 2.0kb downstream 2.0kb downstream 2990 true Bd1: 3910940-3913929 Brachypodium distachyon
Bradi1g05805 2.0kb downstream 2.0kb downstream 2000 false Bd1: 3910940-3912939 Brachypodium distachyon
Bradi1g05805 5.0kb upstream 5.0kb upstream 5990 true Bd1: 3912940-3918929 Brachypodium distachyon
Bradi1g05805 5.0kb upstream 5.0kb upstream 5000 false Bd1: 3913930-3918929 Brachypodium distachyon
Bradi1g05805 5.0kb downstream 5.0kb downstream 5990 true Bd1: 3907940-3913929 Brachypodium distachyon
Bradi1g05805 5.0kb downstream 5.0kb downstream 5000 false Bd1: 3907940-3912939 Brachypodium distachyon
Bradi1g05805 10.0kb upstream 10.0kb upstream 10990 true Bd1: 3912940-3923929 Brachypodium distachyon
Bradi1g05805 10.0kb upstream 10.0kb upstream 10000 false Bd1: 3913930-3923929 Brachypodium distachyon
Bradi1g05805 10.0kb downstream 10.0kb downstream 10990 true Bd1: 3902940-3913929 Brachypodium distachyon
Bradi1g05805 10.0kb downstream 10.0kb downstream 10000 false Bd1: 3902940-3912939 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029213 5273 Angiosperm View MSA
124544990 5269 Grass View MSA
121298583 5274 Embryophyte View MSA
123336547 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain