Gene : Bradi1g06060 B. distachyon v3.1
Defline:  (1 of 1) PTHR11669//PTHR11669:SF1 - REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT // REPLICATION FACTOR C SUBUNIT 3 Genomic Order:  781
Name:  ? Bradi1g06060 Secondary Identifier:  ? PAC:32806873
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g06060 0.5kb upstream 0.5kb upstream 4850 true Bd1: 4070473-4075322 Brachypodium distachyon
Bradi1g06060 0.5kb upstream 0.5kb upstream 500 false Bd1: 4070473-4070972 Brachypodium distachyon
Bradi1g06060 0.5kb downstream 0.5kb downstream 4850 true Bd1: 4070973-4075822 Brachypodium distachyon
Bradi1g06060 0.5kb downstream 0.5kb downstream 500 false Bd1: 4075323-4075822 Brachypodium distachyon
Bradi1g06060 1.0kb upstream 1.0kb upstream 5350 true Bd1: 4069973-4075322 Brachypodium distachyon
Bradi1g06060 1.0kb upstream 1.0kb upstream 1000 false Bd1: 4069973-4070972 Brachypodium distachyon
Bradi1g06060 1.0kb downstream 1.0kb downstream 5350 true Bd1: 4070973-4076322 Brachypodium distachyon
Bradi1g06060 1.0kb downstream 1.0kb downstream 1000 false Bd1: 4075323-4076322 Brachypodium distachyon
Bradi1g06060 2.0kb upstream 2.0kb upstream 6350 true Bd1: 4068973-4075322 Brachypodium distachyon
Bradi1g06060 2.0kb upstream 2.0kb upstream 2000 false Bd1: 4068973-4070972 Brachypodium distachyon
Bradi1g06060 2.0kb downstream 2.0kb downstream 6350 true Bd1: 4070973-4077322 Brachypodium distachyon
Bradi1g06060 2.0kb downstream 2.0kb downstream 2000 false Bd1: 4075323-4077322 Brachypodium distachyon
Bradi1g06060 5.0kb upstream 5.0kb upstream 9350 true Bd1: 4065973-4075322 Brachypodium distachyon
Bradi1g06060 5.0kb upstream 5.0kb upstream 5000 false Bd1: 4065973-4070972 Brachypodium distachyon
Bradi1g06060 5.0kb downstream 5.0kb downstream 9350 true Bd1: 4070973-4080322 Brachypodium distachyon
Bradi1g06060 5.0kb downstream 5.0kb downstream 5000 false Bd1: 4075323-4080322 Brachypodium distachyon
Bradi1g06060 10.0kb upstream 10.0kb upstream 14350 true Bd1: 4060973-4075322 Brachypodium distachyon
Bradi1g06060 10.0kb upstream 10.0kb upstream 10000 false Bd1: 4060973-4070972 Brachypodium distachyon
Bradi1g06060 10.0kb downstream 10.0kb downstream 14350 true Bd1: 4070973-4085322 Brachypodium distachyon
Bradi1g06060 10.0kb downstream 10.0kb downstream 10000 false Bd1: 4075323-4085322 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576425 5269 Grass View MSA
122043390 5273 Angiosperm View MSA
121345700 5274 Embryophyte View MSA
123424767 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.665        
cufflinks 1.896        
cufflinks 1.357        
cufflinks 1.528        
cufflinks 0.633        
cufflinks 1.66        
cufflinks 1.817        
cufflinks 1.435        
cufflinks 1.822        
cufflinks 0.904        
cufflinks 0.554       Low
cufflinks 1.208        
cufflinks 0.496       Low
cufflinks 0.586       Low
cufflinks 0.538       Low
cufflinks 1.778        
cufflinks 1.7        
cufflinks 2.821       High
cufflinks 1.599        
cufflinks 0.437       Low
cufflinks 1.39        
cufflinks 1.325        
cufflinks 1.322        
cufflinks 1.469        
cufflinks 1.764        
cufflinks 1.225        
cufflinks 0.77        
cufflinks 0.977        
cufflinks 1.172        
cufflinks 1.811        

0 Strain