Gene : Bradi1g01100 B. distachyon v3.1
Defline:  (1 of 1) K12590 - exosome complex component RRP46 (RRP46, EXOSC5) Genomic Order:  120
Name:  ? Bradi1g01100 Secondary Identifier:  ? PAC:32797168
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g01100 0.5kb upstream 0.5kb upstream 3008 true Bd1: 746635-749642 Brachypodium distachyon
Bradi1g01100 0.5kb upstream 0.5kb upstream 500 false Bd1: 749143-749642 Brachypodium distachyon
Bradi1g01100 0.5kb downstream 0.5kb downstream 3008 true Bd1: 746135-749142 Brachypodium distachyon
Bradi1g01100 0.5kb downstream 0.5kb downstream 500 false Bd1: 746135-746634 Brachypodium distachyon
Bradi1g01100 1.0kb upstream 1.0kb upstream 3508 true Bd1: 746635-750142 Brachypodium distachyon
Bradi1g01100 1.0kb upstream 1.0kb upstream 1000 false Bd1: 749143-750142 Brachypodium distachyon
Bradi1g01100 1.0kb downstream 1.0kb downstream 3508 true Bd1: 745635-749142 Brachypodium distachyon
Bradi1g01100 1.0kb downstream 1.0kb downstream 1000 false Bd1: 745635-746634 Brachypodium distachyon
Bradi1g01100 2.0kb upstream 2.0kb upstream 4508 true Bd1: 746635-751142 Brachypodium distachyon
Bradi1g01100 2.0kb upstream 2.0kb upstream 2000 false Bd1: 749143-751142 Brachypodium distachyon
Bradi1g01100 2.0kb downstream 2.0kb downstream 4508 true Bd1: 744635-749142 Brachypodium distachyon
Bradi1g01100 2.0kb downstream 2.0kb downstream 2000 false Bd1: 744635-746634 Brachypodium distachyon
Bradi1g01100 5.0kb upstream 5.0kb upstream 7508 true Bd1: 746635-754142 Brachypodium distachyon
Bradi1g01100 5.0kb upstream 5.0kb upstream 5000 false Bd1: 749143-754142 Brachypodium distachyon
Bradi1g01100 5.0kb downstream 5.0kb downstream 7508 true Bd1: 741635-749142 Brachypodium distachyon
Bradi1g01100 5.0kb downstream 5.0kb downstream 5000 false Bd1: 741635-746634 Brachypodium distachyon
Bradi1g01100 10.0kb upstream 10.0kb upstream 12508 true Bd1: 746635-759142 Brachypodium distachyon
Bradi1g01100 10.0kb upstream 10.0kb upstream 10000 false Bd1: 749143-759142 Brachypodium distachyon
Bradi1g01100 10.0kb downstream 10.0kb downstream 12508 true Bd1: 736635-749142 Brachypodium distachyon
Bradi1g01100 10.0kb downstream 10.0kb downstream 10000 false Bd1: 736635-746634 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571639 5269 Grass View MSA
122042132 5273 Angiosperm View MSA
121346708 5274 Embryophyte View MSA
123426253 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.172        
cufflinks 6.381        
cufflinks 4.534        
cufflinks 7.101        
cufflinks 3.149       Low
cufflinks 5.177        
cufflinks 5.818        
cufflinks 4.722        
cufflinks 5.316        
cufflinks 6.597        
cufflinks 2.988       Low
cufflinks 3.803        
cufflinks 1.837       Low
cufflinks 2.794       Low
cufflinks 3.475       Low
cufflinks 5.032        
cufflinks 6.23        
cufflinks 7.262        
cufflinks 7.128        
cufflinks 5.332        
cufflinks 5.372        
cufflinks 4.363        
cufflinks 4.612        
cufflinks 4.389        
cufflinks 6.483        
cufflinks 5.34        
cufflinks 3.571       Low
cufflinks 4.975        
cufflinks 4.194        
cufflinks 4.695        

0 Strain