Gene : Bradi1g01210 B. distachyon v3.1
Defline:  (1 of 6) PF08381//PF13713 - Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N) Genomic Order:  135
Name:  ? Bradi1g01210 Secondary Identifier:  ? PAC:32805160
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g01210 0.5kb upstream 0.5kb upstream 6231 true Bd1: 810536-816766 Brachypodium distachyon
Bradi1g01210 0.5kb upstream 0.5kb upstream 500 false Bd1: 810536-811035 Brachypodium distachyon
Bradi1g01210 0.5kb downstream 0.5kb downstream 6231 true Bd1: 811036-817266 Brachypodium distachyon
Bradi1g01210 0.5kb downstream 0.5kb downstream 500 false Bd1: 816767-817266 Brachypodium distachyon
Bradi1g01210 1.0kb upstream 1.0kb upstream 6731 true Bd1: 810036-816766 Brachypodium distachyon
Bradi1g01210 1.0kb upstream 1.0kb upstream 1000 false Bd1: 810036-811035 Brachypodium distachyon
Bradi1g01210 1.0kb downstream 1.0kb downstream 6731 true Bd1: 811036-817766 Brachypodium distachyon
Bradi1g01210 1.0kb downstream 1.0kb downstream 1000 false Bd1: 816767-817766 Brachypodium distachyon
Bradi1g01210 2.0kb upstream 2.0kb upstream 7731 true Bd1: 809036-816766 Brachypodium distachyon
Bradi1g01210 2.0kb upstream 2.0kb upstream 2000 false Bd1: 809036-811035 Brachypodium distachyon
Bradi1g01210 2.0kb downstream 2.0kb downstream 7731 true Bd1: 811036-818766 Brachypodium distachyon
Bradi1g01210 2.0kb downstream 2.0kb downstream 2000 false Bd1: 816767-818766 Brachypodium distachyon
Bradi1g01210 5.0kb upstream 5.0kb upstream 10731 true Bd1: 806036-816766 Brachypodium distachyon
Bradi1g01210 5.0kb upstream 5.0kb upstream 5000 false Bd1: 806036-811035 Brachypodium distachyon
Bradi1g01210 5.0kb downstream 5.0kb downstream 10731 true Bd1: 811036-821766 Brachypodium distachyon
Bradi1g01210 5.0kb downstream 5.0kb downstream 5000 false Bd1: 816767-821766 Brachypodium distachyon
Bradi1g01210 10.0kb upstream 10.0kb upstream 15731 true Bd1: 801036-816766 Brachypodium distachyon
Bradi1g01210 10.0kb upstream 10.0kb upstream 10000 false Bd1: 801036-811035 Brachypodium distachyon
Bradi1g01210 10.0kb downstream 10.0kb downstream 15731 true Bd1: 811036-826766 Brachypodium distachyon
Bradi1g01210 10.0kb downstream 10.0kb downstream 10000 false Bd1: 816767-826766 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589125 5269 Grass View MSA
122046038 5273 Angiosperm View MSA
121349129 5274 Embryophyte View MSA
123381183 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.13        
cufflinks 0.215        
cufflinks 0.247        
cufflinks 0.239        
cufflinks 0.139        
cufflinks 0.173        
cufflinks 0.147        
cufflinks 0.118        
cufflinks 0.162        
cufflinks 0.336       High
cufflinks 0.069       Low
cufflinks 0.083     Low Low
cufflinks 0.076       Low
cufflinks 0.096       Low
cufflinks 0.104        
cufflinks 0.14        
cufflinks 0.279        
cufflinks 0.203        
cufflinks 0.18     Low  
cufflinks 0.167        
cufflinks 0.402       High
cufflinks 0.179        
cufflinks 0.165        
cufflinks 0.123        
cufflinks 0.224        
cufflinks 0.263        
cufflinks 0.146        
cufflinks 0.274        
cufflinks 0.248        
cufflinks 0.291        

0 Strain