Gene : Bradi1g01220 B. distachyon v3.1
Defline:  (1 of 1) PTHR21596//PTHR21596:SF8 - RIBONUCLEASE P SUBUNIT P38 Genomic Order:  136
Name:  ? Bradi1g01220 Secondary Identifier:  ? PAC:32792297
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g01220 0.5kb upstream 0.5kb upstream 4594 true Bd1: 816341-820934 Brachypodium distachyon
Bradi1g01220 0.5kb upstream 0.5kb upstream 500 false Bd1: 820435-820934 Brachypodium distachyon
Bradi1g01220 0.5kb downstream 0.5kb downstream 4594 true Bd1: 815841-820434 Brachypodium distachyon
Bradi1g01220 0.5kb downstream 0.5kb downstream 500 false Bd1: 815841-816340 Brachypodium distachyon
Bradi1g01220 1.0kb upstream 1.0kb upstream 5094 true Bd1: 816341-821434 Brachypodium distachyon
Bradi1g01220 1.0kb upstream 1.0kb upstream 1000 false Bd1: 820435-821434 Brachypodium distachyon
Bradi1g01220 1.0kb downstream 1.0kb downstream 5094 true Bd1: 815341-820434 Brachypodium distachyon
Bradi1g01220 1.0kb downstream 1.0kb downstream 1000 false Bd1: 815341-816340 Brachypodium distachyon
Bradi1g01220 2.0kb upstream 2.0kb upstream 6094 true Bd1: 816341-822434 Brachypodium distachyon
Bradi1g01220 2.0kb upstream 2.0kb upstream 2000 false Bd1: 820435-822434 Brachypodium distachyon
Bradi1g01220 2.0kb downstream 2.0kb downstream 6094 true Bd1: 814341-820434 Brachypodium distachyon
Bradi1g01220 2.0kb downstream 2.0kb downstream 2000 false Bd1: 814341-816340 Brachypodium distachyon
Bradi1g01220 5.0kb upstream 5.0kb upstream 9094 true Bd1: 816341-825434 Brachypodium distachyon
Bradi1g01220 5.0kb upstream 5.0kb upstream 5000 false Bd1: 820435-825434 Brachypodium distachyon
Bradi1g01220 5.0kb downstream 5.0kb downstream 9094 true Bd1: 811341-820434 Brachypodium distachyon
Bradi1g01220 5.0kb downstream 5.0kb downstream 5000 false Bd1: 811341-816340 Brachypodium distachyon
Bradi1g01220 10.0kb upstream 10.0kb upstream 14094 true Bd1: 816341-830434 Brachypodium distachyon
Bradi1g01220 10.0kb upstream 10.0kb upstream 10000 false Bd1: 820435-830434 Brachypodium distachyon
Bradi1g01220 10.0kb downstream 10.0kb downstream 14094 true Bd1: 806341-820434 Brachypodium distachyon
Bradi1g01220 10.0kb downstream 10.0kb downstream 10000 false Bd1: 806341-816340 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049496 5273 Angiosperm View MSA
124588134 5269 Grass View MSA
121311438 5274 Embryophyte View MSA
123348734 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.027        
cufflinks 2.44        
cufflinks 3.808        
cufflinks 3.057        
cufflinks 2.553        
cufflinks 2.509        
cufflinks 2.598        
cufflinks 2.431        
cufflinks 2.426        
cufflinks 4.264        
cufflinks 0.736       Low
cufflinks 2.163        
cufflinks 0.665       Low
cufflinks 0.667       Low
cufflinks 0.771       Low
cufflinks 2.194        
cufflinks 2.745        
cufflinks 6.688       High
cufflinks 6.123       High
cufflinks 1.279        
cufflinks 4.073        
cufflinks 2.866        
cufflinks 2.308        
cufflinks 2.487        
cufflinks 2.914        
cufflinks 4.833       High
cufflinks 1.217       Low
cufflinks 4.075        
cufflinks 3.533        
cufflinks 5.966       High

0 Strain