Gene : Bradi1g01190 B. distachyon v3.1
Defline:  (1 of 2) 3.1.4.3 - Phospholipase C / Lipophosphodiesterase I Genomic Order:  133
Name:  ? Bradi1g01190 Secondary Identifier:  ? PAC:32795597
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon LIPASYN-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g01190 0.5kb upstream 0.5kb upstream 3185 true Bd1: 798464-801648 Brachypodium distachyon
Bradi1g01190 0.5kb upstream 0.5kb upstream 500 false Bd1: 798464-798963 Brachypodium distachyon
Bradi1g01190 0.5kb downstream 0.5kb downstream 3185 true Bd1: 798964-802148 Brachypodium distachyon
Bradi1g01190 0.5kb downstream 0.5kb downstream 500 false Bd1: 801649-802148 Brachypodium distachyon
Bradi1g01190 1.0kb upstream 1.0kb upstream 3685 true Bd1: 797964-801648 Brachypodium distachyon
Bradi1g01190 1.0kb upstream 1.0kb upstream 1000 false Bd1: 797964-798963 Brachypodium distachyon
Bradi1g01190 1.0kb downstream 1.0kb downstream 3685 true Bd1: 798964-802648 Brachypodium distachyon
Bradi1g01190 1.0kb downstream 1.0kb downstream 1000 false Bd1: 801649-802648 Brachypodium distachyon
Bradi1g01190 2.0kb upstream 2.0kb upstream 4685 true Bd1: 796964-801648 Brachypodium distachyon
Bradi1g01190 2.0kb upstream 2.0kb upstream 2000 false Bd1: 796964-798963 Brachypodium distachyon
Bradi1g01190 2.0kb downstream 2.0kb downstream 4685 true Bd1: 798964-803648 Brachypodium distachyon
Bradi1g01190 2.0kb downstream 2.0kb downstream 2000 false Bd1: 801649-803648 Brachypodium distachyon
Bradi1g01190 5.0kb upstream 5.0kb upstream 7685 true Bd1: 793964-801648 Brachypodium distachyon
Bradi1g01190 5.0kb upstream 5.0kb upstream 5000 false Bd1: 793964-798963 Brachypodium distachyon
Bradi1g01190 5.0kb downstream 5.0kb downstream 7685 true Bd1: 798964-806648 Brachypodium distachyon
Bradi1g01190 5.0kb downstream 5.0kb downstream 5000 false Bd1: 801649-806648 Brachypodium distachyon
Bradi1g01190 10.0kb upstream 10.0kb upstream 12685 true Bd1: 788964-801648 Brachypodium distachyon
Bradi1g01190 10.0kb upstream 10.0kb upstream 10000 false Bd1: 788964-798963 Brachypodium distachyon
Bradi1g01190 10.0kb downstream 10.0kb downstream 12685 true Bd1: 798964-811648 Brachypodium distachyon
Bradi1g01190 10.0kb downstream 10.0kb downstream 10000 false Bd1: 801649-811648 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587656 5269 Grass View MSA
122043766 5273 Angiosperm View MSA
121350885 5274 Embryophyte View MSA
123381922 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.413        
cufflinks 0.494        
cufflinks 0.527        
cufflinks 0.404        
cufflinks 4.243       High
cufflinks 0.351        
cufflinks 0.48        
cufflinks 0.421        
cufflinks 0.404        
cufflinks 0.649        
cufflinks 0.013     Low Low
cufflinks 0.48        
cufflinks 0.027     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.648        
cufflinks 0.438        
cufflinks 0.321        
cufflinks 2.547       High
cufflinks 1.089        
cufflinks 8.344       High
cufflinks 0.318        
cufflinks 0.485        
cufflinks 0.499        
cufflinks 0.625        
cufflinks 0.353        
cufflinks 0.546        
cufflinks 0.028     Low Low
cufflinks 0.462        
cufflinks 0.492        
cufflinks 0.969        

0 Strain