Gene : Bradi1g01520 B. distachyon v3.1
Defline:  (1 of 9) PF07899 - Frigida-like protein (Frigida) Genomic Order:  175
Name:  ? Bradi1g01520 Secondary Identifier:  ? PAC:32792994
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g01520 0.5kb upstream 0.5kb upstream 4380 true Bd1: 982737-987116 Brachypodium distachyon
Bradi1g01520 0.5kb upstream 0.5kb upstream 500 false Bd1: 986617-987116 Brachypodium distachyon
Bradi1g01520 0.5kb downstream 0.5kb downstream 4380 true Bd1: 982237-986616 Brachypodium distachyon
Bradi1g01520 0.5kb downstream 0.5kb downstream 500 false Bd1: 982237-982736 Brachypodium distachyon
Bradi1g01520 1.0kb upstream 1.0kb upstream 4880 true Bd1: 982737-987616 Brachypodium distachyon
Bradi1g01520 1.0kb upstream 1.0kb upstream 1000 false Bd1: 986617-987616 Brachypodium distachyon
Bradi1g01520 1.0kb downstream 1.0kb downstream 4880 true Bd1: 981737-986616 Brachypodium distachyon
Bradi1g01520 1.0kb downstream 1.0kb downstream 1000 false Bd1: 981737-982736 Brachypodium distachyon
Bradi1g01520 2.0kb upstream 2.0kb upstream 5880 true Bd1: 982737-988616 Brachypodium distachyon
Bradi1g01520 2.0kb upstream 2.0kb upstream 2000 false Bd1: 986617-988616 Brachypodium distachyon
Bradi1g01520 2.0kb downstream 2.0kb downstream 5880 true Bd1: 980737-986616 Brachypodium distachyon
Bradi1g01520 2.0kb downstream 2.0kb downstream 2000 false Bd1: 980737-982736 Brachypodium distachyon
Bradi1g01520 5.0kb upstream 5.0kb upstream 8880 true Bd1: 982737-991616 Brachypodium distachyon
Bradi1g01520 5.0kb upstream 5.0kb upstream 5000 false Bd1: 986617-991616 Brachypodium distachyon
Bradi1g01520 5.0kb downstream 5.0kb downstream 8880 true Bd1: 977737-986616 Brachypodium distachyon
Bradi1g01520 5.0kb downstream 5.0kb downstream 5000 false Bd1: 977737-982736 Brachypodium distachyon
Bradi1g01520 10.0kb upstream 10.0kb upstream 13880 true Bd1: 982737-996616 Brachypodium distachyon
Bradi1g01520 10.0kb upstream 10.0kb upstream 10000 false Bd1: 986617-996616 Brachypodium distachyon
Bradi1g01520 10.0kb downstream 10.0kb downstream 13880 true Bd1: 972737-986616 Brachypodium distachyon
Bradi1g01520 10.0kb downstream 10.0kb downstream 10000 false Bd1: 972737-982736 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586684 5269 Grass View MSA
122043307 5273 Angiosperm View MSA
121310105 5274 Embryophyte View MSA
123347687 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.042     Low  
cufflinks 0.059     Low  
cufflinks 0.059     Low  
cufflinks 0.059     Low  
cufflinks 0.153        
cufflinks 0.042     Low  
cufflinks 0.072     Low  
cufflinks 0.072     Low  
cufflinks 0.042     Low  
cufflinks 0.028     Low  
cufflinks 0.02     Low Low
cufflinks 0.056     Low  
cufflinks 0.008     Low Low
cufflinks 0.016     Low Low
cufflinks 0.028     Low  
cufflinks 0.06     Low  
cufflinks 0.028     Low  
cufflinks 0.238       High
cufflinks 0.487       High
cufflinks 1.083       High
cufflinks 0.063     Low  
cufflinks 0.072     Low  
cufflinks 0.098        
cufflinks 0.061     Low  
cufflinks 0.042     Low  
cufflinks 0.081     Low  
cufflinks 0.019     Low Low
cufflinks 0.039     Low  
cufflinks 0.076     Low  
cufflinks 0.107     Low  

0 Strain