Gene : Bradi1g01660 B. distachyon v3.1
Defline:  (1 of 1) PTHR36716:SF2 - F3H9.20 PROTEIN Genomic Order:  195
Name:  ? Bradi1g01660 Secondary Identifier:  ? PAC:32803133
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g01660 0.5kb upstream 0.5kb upstream 2589 true Bd1: 1097854-1100442 Brachypodium distachyon
Bradi1g01660 0.5kb upstream 0.5kb upstream 500 false Bd1: 1099943-1100442 Brachypodium distachyon
Bradi1g01660 0.5kb downstream 0.5kb downstream 2589 true Bd1: 1097354-1099942 Brachypodium distachyon
Bradi1g01660 0.5kb downstream 0.5kb downstream 500 false Bd1: 1097354-1097853 Brachypodium distachyon
Bradi1g01660 1.0kb upstream 1.0kb upstream 3089 true Bd1: 1097854-1100942 Brachypodium distachyon
Bradi1g01660 1.0kb upstream 1.0kb upstream 1000 false Bd1: 1099943-1100942 Brachypodium distachyon
Bradi1g01660 1.0kb downstream 1.0kb downstream 3089 true Bd1: 1096854-1099942 Brachypodium distachyon
Bradi1g01660 1.0kb downstream 1.0kb downstream 1000 false Bd1: 1096854-1097853 Brachypodium distachyon
Bradi1g01660 2.0kb upstream 2.0kb upstream 4089 true Bd1: 1097854-1101942 Brachypodium distachyon
Bradi1g01660 2.0kb upstream 2.0kb upstream 2000 false Bd1: 1099943-1101942 Brachypodium distachyon
Bradi1g01660 2.0kb downstream 2.0kb downstream 4089 true Bd1: 1095854-1099942 Brachypodium distachyon
Bradi1g01660 2.0kb downstream 2.0kb downstream 2000 false Bd1: 1095854-1097853 Brachypodium distachyon
Bradi1g01660 5.0kb upstream 5.0kb upstream 7089 true Bd1: 1097854-1104942 Brachypodium distachyon
Bradi1g01660 5.0kb upstream 5.0kb upstream 5000 false Bd1: 1099943-1104942 Brachypodium distachyon
Bradi1g01660 5.0kb downstream 5.0kb downstream 7089 true Bd1: 1092854-1099942 Brachypodium distachyon
Bradi1g01660 5.0kb downstream 5.0kb downstream 5000 false Bd1: 1092854-1097853 Brachypodium distachyon
Bradi1g01660 10.0kb upstream 10.0kb upstream 12089 true Bd1: 1097854-1109942 Brachypodium distachyon
Bradi1g01660 10.0kb upstream 10.0kb upstream 10000 false Bd1: 1099943-1109942 Brachypodium distachyon
Bradi1g01660 10.0kb downstream 10.0kb downstream 12089 true Bd1: 1087854-1099942 Brachypodium distachyon
Bradi1g01660 10.0kb downstream 10.0kb downstream 10000 false Bd1: 1087854-1097853 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577235 5269 Grass View MSA
122042294 5273 Angiosperm View MSA
121344555 5274 Embryophyte View MSA
123424040 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.799     High  
cufflinks 58.49     High High
cufflinks 19.708     High  
cufflinks 60.228     High High
cufflinks 29.761     High  
cufflinks 28.299     High  
cufflinks 55.438     High High
cufflinks 4.451       Low
cufflinks 13.828     High  
cufflinks 5.696       Low
cufflinks 24.658     High  
cufflinks 14.735     High  
cufflinks 27.182     High  
cufflinks 27.89     High  
cufflinks 11.749     High  
cufflinks 22.983     High  
cufflinks 21.03     High  
cufflinks 7.898       Low
cufflinks 88.385     High High
cufflinks 92.425     High High
cufflinks 25.294     High  
cufflinks 5.372       Low
cufflinks 7.27       Low
cufflinks 18.371     High  
cufflinks 42.572     High  
cufflinks 18.911     High  
cufflinks 44.629     High  
cufflinks 17.502     High  
cufflinks 12.88     High  
cufflinks 26.078     High  

0 Strain