Gene : Bradi1g01670 B. distachyon v3.1
Defline:  (1 of 2) K11548 - kinetochore protein Nuf2 (NUF2, CDCA1) Genomic Order:  196
Name:  ? Bradi1g01670 Secondary Identifier:  ? PAC:32797005
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g01670 0.5kb upstream 0.5kb upstream 4522 true Bd1: 1100220-1104741 Brachypodium distachyon
Bradi1g01670 0.5kb upstream 0.5kb upstream 500 false Bd1: 1100220-1100719 Brachypodium distachyon
Bradi1g01670 0.5kb downstream 0.5kb downstream 4522 true Bd1: 1100720-1105241 Brachypodium distachyon
Bradi1g01670 0.5kb downstream 0.5kb downstream 500 false Bd1: 1104742-1105241 Brachypodium distachyon
Bradi1g01670 1.0kb upstream 1.0kb upstream 5022 true Bd1: 1099720-1104741 Brachypodium distachyon
Bradi1g01670 1.0kb upstream 1.0kb upstream 1000 false Bd1: 1099720-1100719 Brachypodium distachyon
Bradi1g01670 1.0kb downstream 1.0kb downstream 5022 true Bd1: 1100720-1105741 Brachypodium distachyon
Bradi1g01670 1.0kb downstream 1.0kb downstream 1000 false Bd1: 1104742-1105741 Brachypodium distachyon
Bradi1g01670 2.0kb upstream 2.0kb upstream 6022 true Bd1: 1098720-1104741 Brachypodium distachyon
Bradi1g01670 2.0kb upstream 2.0kb upstream 2000 false Bd1: 1098720-1100719 Brachypodium distachyon
Bradi1g01670 2.0kb downstream 2.0kb downstream 6022 true Bd1: 1100720-1106741 Brachypodium distachyon
Bradi1g01670 2.0kb downstream 2.0kb downstream 2000 false Bd1: 1104742-1106741 Brachypodium distachyon
Bradi1g01670 5.0kb upstream 5.0kb upstream 9022 true Bd1: 1095720-1104741 Brachypodium distachyon
Bradi1g01670 5.0kb upstream 5.0kb upstream 5000 false Bd1: 1095720-1100719 Brachypodium distachyon
Bradi1g01670 5.0kb downstream 5.0kb downstream 9022 true Bd1: 1100720-1109741 Brachypodium distachyon
Bradi1g01670 5.0kb downstream 5.0kb downstream 5000 false Bd1: 1104742-1109741 Brachypodium distachyon
Bradi1g01670 10.0kb upstream 10.0kb upstream 14022 true Bd1: 1090720-1104741 Brachypodium distachyon
Bradi1g01670 10.0kb upstream 10.0kb upstream 10000 false Bd1: 1090720-1100719 Brachypodium distachyon
Bradi1g01670 10.0kb downstream 10.0kb downstream 14022 true Bd1: 1100720-1114741 Brachypodium distachyon
Bradi1g01670 10.0kb downstream 10.0kb downstream 10000 false Bd1: 1104742-1114741 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574927 5269 Grass View MSA
122050952 5273 Angiosperm View MSA
121351685 5274 Embryophyte View MSA
123425820 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.673        
cufflinks 2.344        
cufflinks 2.311        
cufflinks 2.08        
cufflinks 1.995        
cufflinks 1.821        
cufflinks 2.113        
cufflinks 1.826        
cufflinks 1.917        
cufflinks 1.284        
cufflinks 0.013     Low Low
cufflinks 1.486        
cufflinks 0.035     Low Low
cufflinks 0.031     Low Low
cufflinks 0.337        
cufflinks 1.888        
cufflinks 3.707        
cufflinks 3.806        
cufflinks 4.646        
cufflinks 0.397        
cufflinks 1.938        
cufflinks 2.379        
cufflinks 1.428        
cufflinks 1.555        
cufflinks 1.982        
cufflinks 2.244        
cufflinks 0.006     Low Low
cufflinks 2.013        
cufflinks 2.114        
cufflinks 2.778        

0 Strain