Gene : Bradi1g01580 B. distachyon v3.1
Defline:  (1 of 1) PTHR23115//PTHR23115:SF155 - TRANSLATION FACTOR // SUBFAMILY NOT NAMED Genomic Order:  181
Name:  ? Bradi1g01580 Secondary Identifier:  ? PAC:32800955
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g01580 0.5kb upstream 0.5kb upstream 4638 true Bd1: 1026876-1031513 Brachypodium distachyon
Bradi1g01580 0.5kb upstream 0.5kb upstream 500 false Bd1: 1026876-1027375 Brachypodium distachyon
Bradi1g01580 0.5kb downstream 0.5kb downstream 4638 true Bd1: 1027376-1032013 Brachypodium distachyon
Bradi1g01580 0.5kb downstream 0.5kb downstream 500 false Bd1: 1031514-1032013 Brachypodium distachyon
Bradi1g01580 1.0kb upstream 1.0kb upstream 5138 true Bd1: 1026376-1031513 Brachypodium distachyon
Bradi1g01580 1.0kb upstream 1.0kb upstream 1000 false Bd1: 1026376-1027375 Brachypodium distachyon
Bradi1g01580 1.0kb downstream 1.0kb downstream 5138 true Bd1: 1027376-1032513 Brachypodium distachyon
Bradi1g01580 1.0kb downstream 1.0kb downstream 1000 false Bd1: 1031514-1032513 Brachypodium distachyon
Bradi1g01580 2.0kb upstream 2.0kb upstream 6138 true Bd1: 1025376-1031513 Brachypodium distachyon
Bradi1g01580 2.0kb upstream 2.0kb upstream 2000 false Bd1: 1025376-1027375 Brachypodium distachyon
Bradi1g01580 2.0kb downstream 2.0kb downstream 6138 true Bd1: 1027376-1033513 Brachypodium distachyon
Bradi1g01580 2.0kb downstream 2.0kb downstream 2000 false Bd1: 1031514-1033513 Brachypodium distachyon
Bradi1g01580 5.0kb upstream 5.0kb upstream 9138 true Bd1: 1022376-1031513 Brachypodium distachyon
Bradi1g01580 5.0kb upstream 5.0kb upstream 5000 false Bd1: 1022376-1027375 Brachypodium distachyon
Bradi1g01580 5.0kb downstream 5.0kb downstream 9138 true Bd1: 1027376-1036513 Brachypodium distachyon
Bradi1g01580 5.0kb downstream 5.0kb downstream 5000 false Bd1: 1031514-1036513 Brachypodium distachyon
Bradi1g01580 10.0kb upstream 10.0kb upstream 14138 true Bd1: 1017376-1031513 Brachypodium distachyon
Bradi1g01580 10.0kb upstream 10.0kb upstream 10000 false Bd1: 1017376-1027375 Brachypodium distachyon
Bradi1g01580 10.0kb downstream 10.0kb downstream 14138 true Bd1: 1027376-1041513 Brachypodium distachyon
Bradi1g01580 10.0kb downstream 10.0kb downstream 10000 false Bd1: 1031514-1041513 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589328 5269 Grass View MSA
122047796 5273 Angiosperm View MSA
121347334 5274 Embryophyte View MSA
123424775 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.62     High  
cufflinks 25.14     High  
cufflinks 21.101     High  
cufflinks 28.392     High  
cufflinks 13.535     High  
cufflinks 20.77     High  
cufflinks 21.157     High  
cufflinks 14.864     High  
cufflinks 17.499     High  
cufflinks 13.618     High  
cufflinks 5.17       Low
cufflinks 15.012     High  
cufflinks 3.299       Low
cufflinks 3.944       Low
cufflinks 7.57       Low
cufflinks 21.592     High  
cufflinks 24.601     High  
cufflinks 47.438     High High
cufflinks 20.904     High  
cufflinks 10.727        
cufflinks 24.5     High  
cufflinks 15.181     High  
cufflinks 14.322     High  
cufflinks 16.851     High  
cufflinks 24.252     High  
cufflinks 18.961     High  
cufflinks 6.043       Low
cufflinks 14.557     High  
cufflinks 13.345     High  
cufflinks 23.745     High  

0 Strain