Gene : Bradi1g01847 B. distachyon v3.1
Defline:  (1 of 1) 6.2.1.20 - Long-chain-fatty-acid--[acyl-carrier-protein] ligase / Acyl-[acyl-carrier-protein] synthetase Genomic Order:  226
Name:  ? Bradi1g01847 Secondary Identifier:  ? PAC:32806586
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6622 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g01847 0.5kb upstream 0.5kb upstream 9918 true Bd1: 1243871-1253788 Brachypodium distachyon
Bradi1g01847 0.5kb upstream 0.5kb upstream 500 false Bd1: 1243871-1244370 Brachypodium distachyon
Bradi1g01847 0.5kb downstream 0.5kb downstream 9918 true Bd1: 1244371-1254288 Brachypodium distachyon
Bradi1g01847 0.5kb downstream 0.5kb downstream 500 false Bd1: 1253789-1254288 Brachypodium distachyon
Bradi1g01847 1.0kb upstream 1.0kb upstream 10418 true Bd1: 1243371-1253788 Brachypodium distachyon
Bradi1g01847 1.0kb upstream 1.0kb upstream 1000 false Bd1: 1243371-1244370 Brachypodium distachyon
Bradi1g01847 1.0kb downstream 1.0kb downstream 10418 true Bd1: 1244371-1254788 Brachypodium distachyon
Bradi1g01847 1.0kb downstream 1.0kb downstream 1000 false Bd1: 1253789-1254788 Brachypodium distachyon
Bradi1g01847 2.0kb upstream 2.0kb upstream 11418 true Bd1: 1242371-1253788 Brachypodium distachyon
Bradi1g01847 2.0kb upstream 2.0kb upstream 2000 false Bd1: 1242371-1244370 Brachypodium distachyon
Bradi1g01847 2.0kb downstream 2.0kb downstream 11418 true Bd1: 1244371-1255788 Brachypodium distachyon
Bradi1g01847 2.0kb downstream 2.0kb downstream 2000 false Bd1: 1253789-1255788 Brachypodium distachyon
Bradi1g01847 5.0kb upstream 5.0kb upstream 14418 true Bd1: 1239371-1253788 Brachypodium distachyon
Bradi1g01847 5.0kb upstream 5.0kb upstream 5000 false Bd1: 1239371-1244370 Brachypodium distachyon
Bradi1g01847 5.0kb downstream 5.0kb downstream 14418 true Bd1: 1244371-1258788 Brachypodium distachyon
Bradi1g01847 5.0kb downstream 5.0kb downstream 5000 false Bd1: 1253789-1258788 Brachypodium distachyon
Bradi1g01847 10.0kb upstream 10.0kb upstream 19418 true Bd1: 1234371-1253788 Brachypodium distachyon
Bradi1g01847 10.0kb upstream 10.0kb upstream 10000 false Bd1: 1234371-1244370 Brachypodium distachyon
Bradi1g01847 10.0kb downstream 10.0kb downstream 19418 true Bd1: 1244371-1263788 Brachypodium distachyon
Bradi1g01847 10.0kb downstream 10.0kb downstream 10000 false Bd1: 1253789-1263788 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571793 5269 Grass View MSA
122041588 5273 Angiosperm View MSA
121344484 5274 Embryophyte View MSA
123427454 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.728        
cufflinks 1.236       High
cufflinks 1.257       High
cufflinks 1.074        
cufflinks 0.494       Low
cufflinks 1.032        
cufflinks 0.962        
cufflinks 0.861        
cufflinks 0.958        
cufflinks 0.668        
cufflinks 1.055        
cufflinks 0.938        
cufflinks 0.613        
cufflinks 0.631        
cufflinks 0.525       Low
cufflinks 1.047        
cufflinks 0.663        
cufflinks 0.531       Low
cufflinks 1.162       High
cufflinks 0.832        
cufflinks 0.579        
cufflinks 1.169       High
cufflinks 0.875        
cufflinks 0.868        
cufflinks 0.894        
cufflinks 1.104        
cufflinks 0.663        
cufflinks 0.955        
cufflinks 1.021        
cufflinks 0.865        

0 Strain