Gene : Bradi1g01873 B. distachyon v3.1
Defline:  (1 of 1) PF01097 - Arthropod defensin (Defensin_2) Genomic Order:  229
Name:  ? Bradi1g01873 Secondary Identifier:  ? PAC:32802283
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g01873 0.5kb upstream 0.5kb upstream 2678 true Bd1: 1263927-1266604 Brachypodium distachyon
Bradi1g01873 0.5kb upstream 0.5kb upstream 500 false Bd1: 1266105-1266604 Brachypodium distachyon
Bradi1g01873 0.5kb downstream 0.5kb downstream 2678 true Bd1: 1263427-1266104 Brachypodium distachyon
Bradi1g01873 0.5kb downstream 0.5kb downstream 500 false Bd1: 1263427-1263926 Brachypodium distachyon
Bradi1g01873 1.0kb upstream 1.0kb upstream 3178 true Bd1: 1263927-1267104 Brachypodium distachyon
Bradi1g01873 1.0kb upstream 1.0kb upstream 1000 false Bd1: 1266105-1267104 Brachypodium distachyon
Bradi1g01873 1.0kb downstream 1.0kb downstream 3178 true Bd1: 1262927-1266104 Brachypodium distachyon
Bradi1g01873 1.0kb downstream 1.0kb downstream 1000 false Bd1: 1262927-1263926 Brachypodium distachyon
Bradi1g01873 2.0kb upstream 2.0kb upstream 4178 true Bd1: 1263927-1268104 Brachypodium distachyon
Bradi1g01873 2.0kb upstream 2.0kb upstream 2000 false Bd1: 1266105-1268104 Brachypodium distachyon
Bradi1g01873 2.0kb downstream 2.0kb downstream 4178 true Bd1: 1261927-1266104 Brachypodium distachyon
Bradi1g01873 2.0kb downstream 2.0kb downstream 2000 false Bd1: 1261927-1263926 Brachypodium distachyon
Bradi1g01873 5.0kb upstream 5.0kb upstream 7178 true Bd1: 1263927-1271104 Brachypodium distachyon
Bradi1g01873 5.0kb upstream 5.0kb upstream 5000 false Bd1: 1266105-1271104 Brachypodium distachyon
Bradi1g01873 5.0kb downstream 5.0kb downstream 7178 true Bd1: 1258927-1266104 Brachypodium distachyon
Bradi1g01873 5.0kb downstream 5.0kb downstream 5000 false Bd1: 1258927-1263926 Brachypodium distachyon
Bradi1g01873 10.0kb upstream 10.0kb upstream 12178 true Bd1: 1263927-1276104 Brachypodium distachyon
Bradi1g01873 10.0kb upstream 10.0kb upstream 10000 false Bd1: 1266105-1276104 Brachypodium distachyon
Bradi1g01873 10.0kb downstream 10.0kb downstream 12178 true Bd1: 1253927-1266104 Brachypodium distachyon
Bradi1g01873 10.0kb downstream 10.0kb downstream 10000 false Bd1: 1253927-1263926 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121897303 5273 Angiosperm Singleton cluster - no MSA
124470154 5269 Grass Singleton cluster - no MSA
121167829 5274 Embryophyte Singleton cluster - no MSA
123206713 5275 Viridiplantae Singleton cluster - no MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.041     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.057     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain