Gene : Bradi1g02010 B. distachyon v3.1
Defline:  (1 of 1) PTHR13395 - SISTER CHROMATID COHESION PROTEIN DCC1-RELATED Genomic Order:  249
Name:  ? Bradi1g02010 Secondary Identifier:  ? PAC:32801316
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g02010 0.5kb upstream 0.5kb upstream 2696 true Bd1: 1354651-1357346 Brachypodium distachyon
Bradi1g02010 0.5kb upstream 0.5kb upstream 500 false Bd1: 1354651-1355150 Brachypodium distachyon
Bradi1g02010 0.5kb downstream 0.5kb downstream 2696 true Bd1: 1355151-1357846 Brachypodium distachyon
Bradi1g02010 0.5kb downstream 0.5kb downstream 500 false Bd1: 1357347-1357846 Brachypodium distachyon
Bradi1g02010 1.0kb upstream 1.0kb upstream 3196 true Bd1: 1354151-1357346 Brachypodium distachyon
Bradi1g02010 1.0kb upstream 1.0kb upstream 1000 false Bd1: 1354151-1355150 Brachypodium distachyon
Bradi1g02010 1.0kb downstream 1.0kb downstream 3196 true Bd1: 1355151-1358346 Brachypodium distachyon
Bradi1g02010 1.0kb downstream 1.0kb downstream 1000 false Bd1: 1357347-1358346 Brachypodium distachyon
Bradi1g02010 2.0kb upstream 2.0kb upstream 4196 true Bd1: 1353151-1357346 Brachypodium distachyon
Bradi1g02010 2.0kb upstream 2.0kb upstream 2000 false Bd1: 1353151-1355150 Brachypodium distachyon
Bradi1g02010 2.0kb downstream 2.0kb downstream 4196 true Bd1: 1355151-1359346 Brachypodium distachyon
Bradi1g02010 2.0kb downstream 2.0kb downstream 2000 false Bd1: 1357347-1359346 Brachypodium distachyon
Bradi1g02010 5.0kb upstream 5.0kb upstream 7196 true Bd1: 1350151-1357346 Brachypodium distachyon
Bradi1g02010 5.0kb upstream 5.0kb upstream 5000 false Bd1: 1350151-1355150 Brachypodium distachyon
Bradi1g02010 5.0kb downstream 5.0kb downstream 7196 true Bd1: 1355151-1362346 Brachypodium distachyon
Bradi1g02010 5.0kb downstream 5.0kb downstream 5000 false Bd1: 1357347-1362346 Brachypodium distachyon
Bradi1g02010 10.0kb upstream 10.0kb upstream 12196 true Bd1: 1345151-1357346 Brachypodium distachyon
Bradi1g02010 10.0kb upstream 10.0kb upstream 10000 false Bd1: 1345151-1355150 Brachypodium distachyon
Bradi1g02010 10.0kb downstream 10.0kb downstream 12196 true Bd1: 1355151-1367346 Brachypodium distachyon
Bradi1g02010 10.0kb downstream 10.0kb downstream 10000 false Bd1: 1357347-1367346 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575033 5269 Grass View MSA
122045586 5273 Angiosperm View MSA
121346207 5274 Embryophyte View MSA
123425480 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.924        
cufflinks 1.156        
cufflinks 1.058        
cufflinks 1.469        
cufflinks 0.108       Low
cufflinks 1.214        
cufflinks 1.332        
cufflinks 1.064        
cufflinks 1.309        
cufflinks 0.662        
cufflinks 0.008     Low Low
cufflinks 0.861        
cufflinks 0.038     Low Low
cufflinks 0.035     Low Low
cufflinks 0.22        
cufflinks 1.396        
cufflinks 0.741        
cufflinks 2.877       High
cufflinks 0.182     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.967        
cufflinks 0.771        
cufflinks 0.527        
cufflinks 0.931        
cufflinks 1.191        
cufflinks 1.222        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.503        
cufflinks 0.855        
cufflinks 1.732        

0 Strain