Gene : Bradi1g02060 B. distachyon v3.1
Defline:  (1 of 77) PF07762 - Protein of unknown function (DUF1618) (DUF1618) Genomic Order:  255
Name:  ? Bradi1g02060 Secondary Identifier:  ? PAC:32802172
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g02060 0.5kb upstream 0.5kb upstream 3470 true Bd1: 1394489-1397958 Brachypodium distachyon
Bradi1g02060 0.5kb upstream 0.5kb upstream 500 false Bd1: 1394489-1394988 Brachypodium distachyon
Bradi1g02060 0.5kb downstream 0.5kb downstream 3470 true Bd1: 1394989-1398458 Brachypodium distachyon
Bradi1g02060 0.5kb downstream 0.5kb downstream 500 false Bd1: 1397959-1398458 Brachypodium distachyon
Bradi1g02060 1.0kb upstream 1.0kb upstream 3970 true Bd1: 1393989-1397958 Brachypodium distachyon
Bradi1g02060 1.0kb upstream 1.0kb upstream 1000 false Bd1: 1393989-1394988 Brachypodium distachyon
Bradi1g02060 1.0kb downstream 1.0kb downstream 3970 true Bd1: 1394989-1398958 Brachypodium distachyon
Bradi1g02060 1.0kb downstream 1.0kb downstream 1000 false Bd1: 1397959-1398958 Brachypodium distachyon
Bradi1g02060 2.0kb upstream 2.0kb upstream 4970 true Bd1: 1392989-1397958 Brachypodium distachyon
Bradi1g02060 2.0kb upstream 2.0kb upstream 2000 false Bd1: 1392989-1394988 Brachypodium distachyon
Bradi1g02060 2.0kb downstream 2.0kb downstream 4970 true Bd1: 1394989-1399958 Brachypodium distachyon
Bradi1g02060 2.0kb downstream 2.0kb downstream 2000 false Bd1: 1397959-1399958 Brachypodium distachyon
Bradi1g02060 5.0kb upstream 5.0kb upstream 7970 true Bd1: 1389989-1397958 Brachypodium distachyon
Bradi1g02060 5.0kb upstream 5.0kb upstream 5000 false Bd1: 1389989-1394988 Brachypodium distachyon
Bradi1g02060 5.0kb downstream 5.0kb downstream 7970 true Bd1: 1394989-1402958 Brachypodium distachyon
Bradi1g02060 5.0kb downstream 5.0kb downstream 5000 false Bd1: 1397959-1402958 Brachypodium distachyon
Bradi1g02060 10.0kb upstream 10.0kb upstream 12970 true Bd1: 1384989-1397958 Brachypodium distachyon
Bradi1g02060 10.0kb upstream 10.0kb upstream 10000 false Bd1: 1384989-1394988 Brachypodium distachyon
Bradi1g02060 10.0kb downstream 10.0kb downstream 12970 true Bd1: 1394989-1407958 Brachypodium distachyon
Bradi1g02060 10.0kb downstream 10.0kb downstream 10000 false Bd1: 1397959-1407958 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994770 5273 Angiosperm View MSA
124585583 5269 Grass View MSA
121264986 5274 Embryophyte View MSA
123303402 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.039     High Low
cufflinks 80.92     High  
cufflinks 77.665     High  
cufflinks 67.371     High  
cufflinks 34.969     High Low
cufflinks 69.581     High  
cufflinks 71.021     High  
cufflinks 72.962     High  
cufflinks 74.367     High  
cufflinks 52.068     High  
cufflinks 50.051     High  
cufflinks 76.36     High  
cufflinks 55.334     High  
cufflinks 50.51     High  
cufflinks 41.217     High  
cufflinks 64.461     High  
cufflinks 49.016     High  
cufflinks 57.418     High  
cufflinks 48.048     High  
cufflinks 16.699     High Low
cufflinks 72.524     High  
cufflinks 67.912     High  
cufflinks 67.225     High  
cufflinks 63.815     High  
cufflinks 57.164     High  
cufflinks 66.357     High  
cufflinks 78.183     High  
cufflinks 68.351     High  
cufflinks 71.547     High  
cufflinks 88.657     High High

0 Strain