Gene : Bradi1g02490 B. distachyon v3.1
Defline:  (1 of 2) 6.3.4.21 - Nicotinate phosphoribosyltransferase / Nicotinic acid phosphoribosyltransferase Genomic Order:  312
Name:  ? Bradi1g02490 Secondary Identifier:  ? PAC:32802771
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5381 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g02490 0.5kb upstream 0.5kb upstream 5939 true Bd1: 1684453-1690391 Brachypodium distachyon
Bradi1g02490 0.5kb upstream 0.5kb upstream 500 false Bd1: 1684453-1684952 Brachypodium distachyon
Bradi1g02490 0.5kb downstream 0.5kb downstream 5939 true Bd1: 1684953-1690891 Brachypodium distachyon
Bradi1g02490 0.5kb downstream 0.5kb downstream 500 false Bd1: 1690392-1690891 Brachypodium distachyon
Bradi1g02490 1.0kb upstream 1.0kb upstream 6439 true Bd1: 1683953-1690391 Brachypodium distachyon
Bradi1g02490 1.0kb upstream 1.0kb upstream 1000 false Bd1: 1683953-1684952 Brachypodium distachyon
Bradi1g02490 1.0kb downstream 1.0kb downstream 6439 true Bd1: 1684953-1691391 Brachypodium distachyon
Bradi1g02490 1.0kb downstream 1.0kb downstream 1000 false Bd1: 1690392-1691391 Brachypodium distachyon
Bradi1g02490 2.0kb upstream 2.0kb upstream 7439 true Bd1: 1682953-1690391 Brachypodium distachyon
Bradi1g02490 2.0kb upstream 2.0kb upstream 2000 false Bd1: 1682953-1684952 Brachypodium distachyon
Bradi1g02490 2.0kb downstream 2.0kb downstream 7439 true Bd1: 1684953-1692391 Brachypodium distachyon
Bradi1g02490 2.0kb downstream 2.0kb downstream 2000 false Bd1: 1690392-1692391 Brachypodium distachyon
Bradi1g02490 5.0kb upstream 5.0kb upstream 10439 true Bd1: 1679953-1690391 Brachypodium distachyon
Bradi1g02490 5.0kb upstream 5.0kb upstream 5000 false Bd1: 1679953-1684952 Brachypodium distachyon
Bradi1g02490 5.0kb downstream 5.0kb downstream 10439 true Bd1: 1684953-1695391 Brachypodium distachyon
Bradi1g02490 5.0kb downstream 5.0kb downstream 5000 false Bd1: 1690392-1695391 Brachypodium distachyon
Bradi1g02490 10.0kb upstream 10.0kb upstream 15439 true Bd1: 1674953-1690391 Brachypodium distachyon
Bradi1g02490 10.0kb upstream 10.0kb upstream 10000 false Bd1: 1674953-1684952 Brachypodium distachyon
Bradi1g02490 10.0kb downstream 10.0kb downstream 15439 true Bd1: 1684953-1700391 Brachypodium distachyon
Bradi1g02490 10.0kb downstream 10.0kb downstream 10000 false Bd1: 1690392-1700391 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588747 5269 Grass View MSA
122047355 5273 Angiosperm View MSA
121346796 5274 Embryophyte View MSA
123425475 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.655     High  
cufflinks 14.29     High  
cufflinks 16.22     High  
cufflinks 14.592     High  
cufflinks 9.609     High Low
cufflinks 15.503     High  
cufflinks 13.332     High  
cufflinks 14.572     High  
cufflinks 16.672     High  
cufflinks 14.809     High  
cufflinks 15.069     High  
cufflinks 13.806     High  
cufflinks 15.999     High  
cufflinks 16.094     High  
cufflinks 11.954     High  
cufflinks 15.463     High  
cufflinks 12.307     High  
cufflinks 18.933     High High
cufflinks 7.982       Low
cufflinks 6.298       Low
cufflinks 16.342     High  
cufflinks 17.719     High High
cufflinks 13.945     High  
cufflinks 15.3     High  
cufflinks 14.538     High  
cufflinks 17.351     High  
cufflinks 21.264     High High
cufflinks 18.508     High High
cufflinks 17.553     High  
cufflinks 13.736     High  

0 Strain