Gene : Bradi1g03620 B. distachyon v3.1
Defline:  (1 of 63) PF03514 - GRAS domain family (GRAS) Genomic Order:  449
Name:  ? Bradi1g03620 Secondary Identifier:  ? PAC:32799068
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g03620 0.5kb upstream 0.5kb upstream 3479 true Bd1: 2396724-2400202 Brachypodium distachyon
Bradi1g03620 0.5kb upstream 0.5kb upstream 500 false Bd1: 2399703-2400202 Brachypodium distachyon
Bradi1g03620 0.5kb downstream 0.5kb downstream 3479 true Bd1: 2396224-2399702 Brachypodium distachyon
Bradi1g03620 0.5kb downstream 0.5kb downstream 500 false Bd1: 2396224-2396723 Brachypodium distachyon
Bradi1g03620 1.0kb upstream 1.0kb upstream 3979 true Bd1: 2396724-2400702 Brachypodium distachyon
Bradi1g03620 1.0kb upstream 1.0kb upstream 1000 false Bd1: 2399703-2400702 Brachypodium distachyon
Bradi1g03620 1.0kb downstream 1.0kb downstream 3979 true Bd1: 2395724-2399702 Brachypodium distachyon
Bradi1g03620 1.0kb downstream 1.0kb downstream 1000 false Bd1: 2395724-2396723 Brachypodium distachyon
Bradi1g03620 2.0kb upstream 2.0kb upstream 4979 true Bd1: 2396724-2401702 Brachypodium distachyon
Bradi1g03620 2.0kb upstream 2.0kb upstream 2000 false Bd1: 2399703-2401702 Brachypodium distachyon
Bradi1g03620 2.0kb downstream 2.0kb downstream 4979 true Bd1: 2394724-2399702 Brachypodium distachyon
Bradi1g03620 2.0kb downstream 2.0kb downstream 2000 false Bd1: 2394724-2396723 Brachypodium distachyon
Bradi1g03620 5.0kb upstream 5.0kb upstream 7979 true Bd1: 2396724-2404702 Brachypodium distachyon
Bradi1g03620 5.0kb upstream 5.0kb upstream 5000 false Bd1: 2399703-2404702 Brachypodium distachyon
Bradi1g03620 5.0kb downstream 5.0kb downstream 7979 true Bd1: 2391724-2399702 Brachypodium distachyon
Bradi1g03620 5.0kb downstream 5.0kb downstream 5000 false Bd1: 2391724-2396723 Brachypodium distachyon
Bradi1g03620 10.0kb upstream 10.0kb upstream 12979 true Bd1: 2396724-2409702 Brachypodium distachyon
Bradi1g03620 10.0kb upstream 10.0kb upstream 10000 false Bd1: 2399703-2409702 Brachypodium distachyon
Bradi1g03620 10.0kb downstream 10.0kb downstream 12979 true Bd1: 2386724-2399702 Brachypodium distachyon
Bradi1g03620 10.0kb downstream 10.0kb downstream 10000 false Bd1: 2386724-2396723 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122032262 5273 Angiosperm View MSA
124575610 5269 Grass View MSA
121351918 5274 Embryophyte View MSA
123382411 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.936       High
cufflinks 0.972        
cufflinks 0.787        
cufflinks 0.613        
cufflinks 1.876       High
cufflinks 0.729        
cufflinks 0.838        
cufflinks 0.586        
cufflinks 0.623        
cufflinks 0.71        
cufflinks 0.93        
cufflinks 0.713        
cufflinks 0.682        
cufflinks 0.613        
cufflinks 0.703        
cufflinks 0.676        
cufflinks 0.495       Low
cufflinks 2.485       High
cufflinks 2.02       High
cufflinks 4.271       High
cufflinks 1.303        
cufflinks 0.62        
cufflinks 0.543       Low
cufflinks 0.659        
cufflinks 0.716        
cufflinks 0.706        
cufflinks 1.8       High
cufflinks 0.876        
cufflinks 0.796        
cufflinks 1.147        

0 Strain