Gene : Bradi1g03550 B. distachyon v3.1
Defline:  (1 of 1) 3.5.1.5 - Urease Genomic Order:  440
Name:  ? Bradi1g03550 Secondary Identifier:  ? PAC:32799430
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5704 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g03550 0.5kb upstream 0.5kb upstream 15081 true Bd1: 2353914-2368994 Brachypodium distachyon
Bradi1g03550 0.5kb upstream 0.5kb upstream 500 false Bd1: 2368495-2368994 Brachypodium distachyon
Bradi1g03550 0.5kb downstream 0.5kb downstream 15081 true Bd1: 2353414-2368494 Brachypodium distachyon
Bradi1g03550 0.5kb downstream 0.5kb downstream 500 false Bd1: 2353414-2353913 Brachypodium distachyon
Bradi1g03550 1.0kb upstream 1.0kb upstream 15581 true Bd1: 2353914-2369494 Brachypodium distachyon
Bradi1g03550 1.0kb upstream 1.0kb upstream 1000 false Bd1: 2368495-2369494 Brachypodium distachyon
Bradi1g03550 1.0kb downstream 1.0kb downstream 15581 true Bd1: 2352914-2368494 Brachypodium distachyon
Bradi1g03550 1.0kb downstream 1.0kb downstream 1000 false Bd1: 2352914-2353913 Brachypodium distachyon
Bradi1g03550 2.0kb upstream 2.0kb upstream 16581 true Bd1: 2353914-2370494 Brachypodium distachyon
Bradi1g03550 2.0kb upstream 2.0kb upstream 2000 false Bd1: 2368495-2370494 Brachypodium distachyon
Bradi1g03550 2.0kb downstream 2.0kb downstream 16581 true Bd1: 2351914-2368494 Brachypodium distachyon
Bradi1g03550 2.0kb downstream 2.0kb downstream 2000 false Bd1: 2351914-2353913 Brachypodium distachyon
Bradi1g03550 5.0kb upstream 5.0kb upstream 19581 true Bd1: 2353914-2373494 Brachypodium distachyon
Bradi1g03550 5.0kb upstream 5.0kb upstream 5000 false Bd1: 2368495-2373494 Brachypodium distachyon
Bradi1g03550 5.0kb downstream 5.0kb downstream 19581 true Bd1: 2348914-2368494 Brachypodium distachyon
Bradi1g03550 5.0kb downstream 5.0kb downstream 5000 false Bd1: 2348914-2353913 Brachypodium distachyon
Bradi1g03550 10.0kb upstream 10.0kb upstream 24581 true Bd1: 2353914-2378494 Brachypodium distachyon
Bradi1g03550 10.0kb upstream 10.0kb upstream 10000 false Bd1: 2368495-2378494 Brachypodium distachyon
Bradi1g03550 10.0kb downstream 10.0kb downstream 24581 true Bd1: 2343914-2368494 Brachypodium distachyon
Bradi1g03550 10.0kb downstream 10.0kb downstream 10000 false Bd1: 2343914-2353913 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569834 5269 Grass View MSA
122047668 5273 Angiosperm View MSA
121343969 5274 Embryophyte View MSA
123425205 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.616        
cufflinks 3.175        
cufflinks 2.512        
cufflinks 2.314        
cufflinks 0.968       Low
cufflinks 3.198        
cufflinks 3.178        
cufflinks 2.092        
cufflinks 2.911        
cufflinks 1.7        
cufflinks 3.955       High
cufflinks 3.126        
cufflinks 3.145        
cufflinks 2.899        
cufflinks 1.965        
cufflinks 3.324        
cufflinks 1.616        
cufflinks 2.895        
cufflinks 1.186       Low
cufflinks 0.52       Low
cufflinks 1.595        
cufflinks 2.811        
cufflinks 2.109        
cufflinks 2.564        
cufflinks 2.545        
cufflinks 2.314        
cufflinks 5.138       High
cufflinks 2.178        
cufflinks 2.26        
cufflinks 2.262        

0 Strain