Gene : Bradi1g09173 B. distachyon v3.1
Defline:  (1 of 2) PTHR12072:SF5 - CWF19-LIKE PROTEIN 2 Genomic Order:  1176
Name:  ? Bradi1g09173 Secondary Identifier:  ? PAC:32799886
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g09173 0.5kb upstream 0.5kb upstream 3765 true Bd1: 6550931-6554695 Brachypodium distachyon
Bradi1g09173 0.5kb upstream 0.5kb upstream 500 false Bd1: 6554196-6554695 Brachypodium distachyon
Bradi1g09173 0.5kb downstream 0.5kb downstream 3765 true Bd1: 6550431-6554195 Brachypodium distachyon
Bradi1g09173 0.5kb downstream 0.5kb downstream 500 false Bd1: 6550431-6550930 Brachypodium distachyon
Bradi1g09173 1.0kb upstream 1.0kb upstream 4265 true Bd1: 6550931-6555195 Brachypodium distachyon
Bradi1g09173 1.0kb upstream 1.0kb upstream 1000 false Bd1: 6554196-6555195 Brachypodium distachyon
Bradi1g09173 1.0kb downstream 1.0kb downstream 4265 true Bd1: 6549931-6554195 Brachypodium distachyon
Bradi1g09173 1.0kb downstream 1.0kb downstream 1000 false Bd1: 6549931-6550930 Brachypodium distachyon
Bradi1g09173 2.0kb upstream 2.0kb upstream 5265 true Bd1: 6550931-6556195 Brachypodium distachyon
Bradi1g09173 2.0kb upstream 2.0kb upstream 2000 false Bd1: 6554196-6556195 Brachypodium distachyon
Bradi1g09173 2.0kb downstream 2.0kb downstream 5265 true Bd1: 6548931-6554195 Brachypodium distachyon
Bradi1g09173 2.0kb downstream 2.0kb downstream 2000 false Bd1: 6548931-6550930 Brachypodium distachyon
Bradi1g09173 5.0kb upstream 5.0kb upstream 8265 true Bd1: 6550931-6559195 Brachypodium distachyon
Bradi1g09173 5.0kb upstream 5.0kb upstream 5000 false Bd1: 6554196-6559195 Brachypodium distachyon
Bradi1g09173 5.0kb downstream 5.0kb downstream 8265 true Bd1: 6545931-6554195 Brachypodium distachyon
Bradi1g09173 5.0kb downstream 5.0kb downstream 5000 false Bd1: 6545931-6550930 Brachypodium distachyon
Bradi1g09173 10.0kb upstream 10.0kb upstream 13265 true Bd1: 6550931-6564195 Brachypodium distachyon
Bradi1g09173 10.0kb upstream 10.0kb upstream 10000 false Bd1: 6554196-6564195 Brachypodium distachyon
Bradi1g09173 10.0kb downstream 10.0kb downstream 13265 true Bd1: 6540931-6554195 Brachypodium distachyon
Bradi1g09173 10.0kb downstream 10.0kb downstream 10000 false Bd1: 6540931-6550930 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121897015 5273 Angiosperm Singleton cluster - no MSA
124469858 5269 Grass Singleton cluster - no MSA
121167543 5274 Embryophyte Singleton cluster - no MSA
123428067 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.605        
cufflinks 0.46        
cufflinks 0.372        
cufflinks 0.597        
cufflinks 2.97       High
cufflinks 0.451        
cufflinks 0.423        
cufflinks 0.474        
cufflinks 0.477        
cufflinks 0.406        
cufflinks 0.48        
cufflinks 0.35        
cufflinks 0.302        
cufflinks 0.345        
cufflinks 0.619        
cufflinks 0.345        
cufflinks 0.341        
cufflinks 0.379        
cufflinks 0.212       Low
cufflinks 1.107       High
cufflinks 0.493        
cufflinks 0.327        
cufflinks 0.472        
cufflinks 0.43        
cufflinks 0.53        
cufflinks 0.443        
cufflinks 0.339        
cufflinks 0.39        
cufflinks 0.304        
cufflinks 0.488        

0 Strain