Gene : Bradi1g09100 B. distachyon v3.1
Defline:  (1 of 1) PTHR11141//PTHR11141:SF4 - PROTEIN TRANSPORT PROTEIN SEC23 // SUBFAMILY NOT NAMED Genomic Order:  1164
Name:  ? Bradi1g09100 Secondary Identifier:  ? PAC:32801517
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g09100 0.5kb upstream 0.5kb upstream 4507 true Bd1: 6460426-6464932 Brachypodium distachyon
Bradi1g09100 0.5kb upstream 0.5kb upstream 500 false Bd1: 6464433-6464932 Brachypodium distachyon
Bradi1g09100 0.5kb downstream 0.5kb downstream 4507 true Bd1: 6459926-6464432 Brachypodium distachyon
Bradi1g09100 0.5kb downstream 0.5kb downstream 500 false Bd1: 6459926-6460425 Brachypodium distachyon
Bradi1g09100 1.0kb upstream 1.0kb upstream 5007 true Bd1: 6460426-6465432 Brachypodium distachyon
Bradi1g09100 1.0kb upstream 1.0kb upstream 1000 false Bd1: 6464433-6465432 Brachypodium distachyon
Bradi1g09100 1.0kb downstream 1.0kb downstream 5007 true Bd1: 6459426-6464432 Brachypodium distachyon
Bradi1g09100 1.0kb downstream 1.0kb downstream 1000 false Bd1: 6459426-6460425 Brachypodium distachyon
Bradi1g09100 2.0kb upstream 2.0kb upstream 6007 true Bd1: 6460426-6466432 Brachypodium distachyon
Bradi1g09100 2.0kb upstream 2.0kb upstream 2000 false Bd1: 6464433-6466432 Brachypodium distachyon
Bradi1g09100 2.0kb downstream 2.0kb downstream 6007 true Bd1: 6458426-6464432 Brachypodium distachyon
Bradi1g09100 2.0kb downstream 2.0kb downstream 2000 false Bd1: 6458426-6460425 Brachypodium distachyon
Bradi1g09100 5.0kb upstream 5.0kb upstream 9007 true Bd1: 6460426-6469432 Brachypodium distachyon
Bradi1g09100 5.0kb upstream 5.0kb upstream 5000 false Bd1: 6464433-6469432 Brachypodium distachyon
Bradi1g09100 5.0kb downstream 5.0kb downstream 9007 true Bd1: 6455426-6464432 Brachypodium distachyon
Bradi1g09100 5.0kb downstream 5.0kb downstream 5000 false Bd1: 6455426-6460425 Brachypodium distachyon
Bradi1g09100 10.0kb upstream 10.0kb upstream 14007 true Bd1: 6460426-6474432 Brachypodium distachyon
Bradi1g09100 10.0kb upstream 10.0kb upstream 10000 false Bd1: 6464433-6474432 Brachypodium distachyon
Bradi1g09100 10.0kb downstream 10.0kb downstream 14007 true Bd1: 6450426-6464432 Brachypodium distachyon
Bradi1g09100 10.0kb downstream 10.0kb downstream 10000 false Bd1: 6450426-6460425 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577237 5269 Grass View MSA
122047908 5273 Angiosperm View MSA
121344770 5274 Embryophyte View MSA
123427176 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.947       Low
cufflinks 6.468        
cufflinks 6.326        
cufflinks 4.642        
cufflinks 2.275       Low
cufflinks 5.75        
cufflinks 6.077        
cufflinks 5.16        
cufflinks 5.145        
cufflinks 4.228        
cufflinks 5.16        
cufflinks 5.646        
cufflinks 4.274        
cufflinks 4.273        
cufflinks 2.723        
cufflinks 5.508        
cufflinks 3.067        
cufflinks 7.008        
cufflinks 3.994        
cufflinks 1.223       Low
cufflinks 4.965        
cufflinks 6.248        
cufflinks 4.727        
cufflinks 4.927        
cufflinks 4.638        
cufflinks 5.427        
cufflinks 4.529        
cufflinks 5.303        
cufflinks 5.395        
cufflinks 7.143        

0 Strain