Gene : Bradi1g09246 B. distachyon v3.1
Defline:  (1 of 27) PF03000 - NPH3 family (NPH3) Genomic Order:  1187
Name:  ? Bradi1g09246 Secondary Identifier:  ? PAC:32802847
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g09246 0.5kb upstream 0.5kb upstream 3944 true Bd1: 6622164-6626107 Brachypodium distachyon
Bradi1g09246 0.5kb upstream 0.5kb upstream 500 false Bd1: 6625608-6626107 Brachypodium distachyon
Bradi1g09246 0.5kb downstream 0.5kb downstream 3944 true Bd1: 6621664-6625607 Brachypodium distachyon
Bradi1g09246 0.5kb downstream 0.5kb downstream 500 false Bd1: 6621664-6622163 Brachypodium distachyon
Bradi1g09246 1.0kb upstream 1.0kb upstream 4444 true Bd1: 6622164-6626607 Brachypodium distachyon
Bradi1g09246 1.0kb upstream 1.0kb upstream 1000 false Bd1: 6625608-6626607 Brachypodium distachyon
Bradi1g09246 1.0kb downstream 1.0kb downstream 4444 true Bd1: 6621164-6625607 Brachypodium distachyon
Bradi1g09246 1.0kb downstream 1.0kb downstream 1000 false Bd1: 6621164-6622163 Brachypodium distachyon
Bradi1g09246 2.0kb upstream 2.0kb upstream 5444 true Bd1: 6622164-6627607 Brachypodium distachyon
Bradi1g09246 2.0kb upstream 2.0kb upstream 2000 false Bd1: 6625608-6627607 Brachypodium distachyon
Bradi1g09246 2.0kb downstream 2.0kb downstream 5444 true Bd1: 6620164-6625607 Brachypodium distachyon
Bradi1g09246 2.0kb downstream 2.0kb downstream 2000 false Bd1: 6620164-6622163 Brachypodium distachyon
Bradi1g09246 5.0kb upstream 5.0kb upstream 8444 true Bd1: 6622164-6630607 Brachypodium distachyon
Bradi1g09246 5.0kb upstream 5.0kb upstream 5000 false Bd1: 6625608-6630607 Brachypodium distachyon
Bradi1g09246 5.0kb downstream 5.0kb downstream 8444 true Bd1: 6617164-6625607 Brachypodium distachyon
Bradi1g09246 5.0kb downstream 5.0kb downstream 5000 false Bd1: 6617164-6622163 Brachypodium distachyon
Bradi1g09246 10.0kb upstream 10.0kb upstream 13444 true Bd1: 6622164-6635607 Brachypodium distachyon
Bradi1g09246 10.0kb upstream 10.0kb upstream 10000 false Bd1: 6625608-6635607 Brachypodium distachyon
Bradi1g09246 10.0kb downstream 10.0kb downstream 13444 true Bd1: 6612164-6625607 Brachypodium distachyon
Bradi1g09246 10.0kb downstream 10.0kb downstream 10000 false Bd1: 6612164-6622163 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584062 5269 Grass View MSA
122048903 5273 Angiosperm View MSA
121311163 5274 Embryophyte View MSA
123348497 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.066        
cufflinks 2.105        
cufflinks 2.014        
cufflinks 2.746        
cufflinks 2.325        
cufflinks 2.089        
cufflinks 2.625        
cufflinks 1.806        
cufflinks 2.24        
cufflinks 2.376        
cufflinks 0.538       Low
cufflinks 1.347        
cufflinks 0.656       Low
cufflinks 0.447       Low
cufflinks 0.969        
cufflinks 1.732        
cufflinks 2.881        
cufflinks 1.837        
cufflinks 7.707       High
cufflinks 1.691        
cufflinks 1.042        
cufflinks 1.617        
cufflinks 2.632        
cufflinks 2.55        
cufflinks 2.675        
cufflinks 1.801        
cufflinks 0.338       Low
cufflinks 2.407        
cufflinks 2.116        
cufflinks 2.551        

0 Strain