Gene : Bradi1g09260 B. distachyon v3.1
Defline:  (1 of 2) PTHR11771//PTHR11771:SF54 - LIPOXYGENASE // SUBFAMILY NOT NAMED Genomic Order:  1189
Name:  ? Bradi1g09260 Secondary Identifier:  ? PAC:32797825
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g09260 0.5kb upstream 0.5kb upstream 3947 true Bd1: 6631447-6635393 Brachypodium distachyon
Bradi1g09260 0.5kb upstream 0.5kb upstream 500 false Bd1: 6634894-6635393 Brachypodium distachyon
Bradi1g09260 0.5kb downstream 0.5kb downstream 3947 true Bd1: 6630947-6634893 Brachypodium distachyon
Bradi1g09260 0.5kb downstream 0.5kb downstream 500 false Bd1: 6630947-6631446 Brachypodium distachyon
Bradi1g09260 1.0kb upstream 1.0kb upstream 4447 true Bd1: 6631447-6635893 Brachypodium distachyon
Bradi1g09260 1.0kb upstream 1.0kb upstream 1000 false Bd1: 6634894-6635893 Brachypodium distachyon
Bradi1g09260 1.0kb downstream 1.0kb downstream 4447 true Bd1: 6630447-6634893 Brachypodium distachyon
Bradi1g09260 1.0kb downstream 1.0kb downstream 1000 false Bd1: 6630447-6631446 Brachypodium distachyon
Bradi1g09260 2.0kb upstream 2.0kb upstream 5447 true Bd1: 6631447-6636893 Brachypodium distachyon
Bradi1g09260 2.0kb upstream 2.0kb upstream 2000 false Bd1: 6634894-6636893 Brachypodium distachyon
Bradi1g09260 2.0kb downstream 2.0kb downstream 5447 true Bd1: 6629447-6634893 Brachypodium distachyon
Bradi1g09260 2.0kb downstream 2.0kb downstream 2000 false Bd1: 6629447-6631446 Brachypodium distachyon
Bradi1g09260 5.0kb upstream 5.0kb upstream 8447 true Bd1: 6631447-6639893 Brachypodium distachyon
Bradi1g09260 5.0kb upstream 5.0kb upstream 5000 false Bd1: 6634894-6639893 Brachypodium distachyon
Bradi1g09260 5.0kb downstream 5.0kb downstream 8447 true Bd1: 6626447-6634893 Brachypodium distachyon
Bradi1g09260 5.0kb downstream 5.0kb downstream 5000 false Bd1: 6626447-6631446 Brachypodium distachyon
Bradi1g09260 10.0kb upstream 10.0kb upstream 13447 true Bd1: 6631447-6644893 Brachypodium distachyon
Bradi1g09260 10.0kb upstream 10.0kb upstream 10000 false Bd1: 6634894-6644893 Brachypodium distachyon
Bradi1g09260 10.0kb downstream 10.0kb downstream 13447 true Bd1: 6621447-6634893 Brachypodium distachyon
Bradi1g09260 10.0kb downstream 10.0kb downstream 10000 false Bd1: 6621447-6631446 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585684 5269 Grass View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.056     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  
cufflinks 0.005     Low  
cufflinks 0.09        
cufflinks 0.064     Low  
cufflinks 0.037     Low  
cufflinks 0.03     Low  
cufflinks 0.065     Low  
cufflinks 0.068     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 28.007     High High
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.009     Low  
cufflinks 0.024     Low  
cufflinks 0.026     Low  
cufflinks 0.022     Low  
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  

0 Strain