Gene : Bradi1g09270 B. distachyon v3.1
Defline:  (1 of 2) PTHR11771//PTHR11771:SF54 - LIPOXYGENASE // SUBFAMILY NOT NAMED Genomic Order:  1190
Name:  ? Bradi1g09270 Secondary Identifier:  ? PAC:32801012
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g09270 0.5kb upstream 0.5kb upstream 3963 true Bd1: 6641282-6645244 Brachypodium distachyon
Bradi1g09270 0.5kb upstream 0.5kb upstream 500 false Bd1: 6644745-6645244 Brachypodium distachyon
Bradi1g09270 0.5kb downstream 0.5kb downstream 3963 true Bd1: 6640782-6644744 Brachypodium distachyon
Bradi1g09270 0.5kb downstream 0.5kb downstream 500 false Bd1: 6640782-6641281 Brachypodium distachyon
Bradi1g09270 1.0kb upstream 1.0kb upstream 4463 true Bd1: 6641282-6645744 Brachypodium distachyon
Bradi1g09270 1.0kb upstream 1.0kb upstream 1000 false Bd1: 6644745-6645744 Brachypodium distachyon
Bradi1g09270 1.0kb downstream 1.0kb downstream 4463 true Bd1: 6640282-6644744 Brachypodium distachyon
Bradi1g09270 1.0kb downstream 1.0kb downstream 1000 false Bd1: 6640282-6641281 Brachypodium distachyon
Bradi1g09270 2.0kb upstream 2.0kb upstream 5463 true Bd1: 6641282-6646744 Brachypodium distachyon
Bradi1g09270 2.0kb upstream 2.0kb upstream 2000 false Bd1: 6644745-6646744 Brachypodium distachyon
Bradi1g09270 2.0kb downstream 2.0kb downstream 5463 true Bd1: 6639282-6644744 Brachypodium distachyon
Bradi1g09270 2.0kb downstream 2.0kb downstream 2000 false Bd1: 6639282-6641281 Brachypodium distachyon
Bradi1g09270 5.0kb upstream 5.0kb upstream 8463 true Bd1: 6641282-6649744 Brachypodium distachyon
Bradi1g09270 5.0kb upstream 5.0kb upstream 5000 false Bd1: 6644745-6649744 Brachypodium distachyon
Bradi1g09270 5.0kb downstream 5.0kb downstream 8463 true Bd1: 6636282-6644744 Brachypodium distachyon
Bradi1g09270 5.0kb downstream 5.0kb downstream 5000 false Bd1: 6636282-6641281 Brachypodium distachyon
Bradi1g09270 10.0kb upstream 10.0kb upstream 13463 true Bd1: 6641282-6654744 Brachypodium distachyon
Bradi1g09270 10.0kb upstream 10.0kb upstream 10000 false Bd1: 6644745-6654744 Brachypodium distachyon
Bradi1g09270 10.0kb downstream 10.0kb downstream 13463 true Bd1: 6631282-6644744 Brachypodium distachyon
Bradi1g09270 10.0kb downstream 10.0kb downstream 10000 false Bd1: 6631282-6641281 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585684 5269 Grass View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.114       Low
cufflinks 5.316        
cufflinks 3.706        
cufflinks 3.247        
cufflinks 4.901        
cufflinks 1.644        
cufflinks 4.179        
cufflinks 0.995        
cufflinks 2.594        
cufflinks 1.161        
cufflinks 0.005     Low Low
cufflinks 0.899        
cufflinks 0.012     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.312        
cufflinks 0.726        
cufflinks 0.206        
cufflinks 10.2       High
cufflinks 3.289        
cufflinks 0.596        
cufflinks 0.08     Low Low
cufflinks 2.23        
cufflinks 5.475        
cufflinks 3.992        
cufflinks 4.191        
cufflinks 2.102        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.036        
cufflinks 2.92        
cufflinks 1.089        

0 Strain