Gene : Bradi1g09370 B. distachyon v3.1
Defline:  (1 of 1) K06634 - cyclin H (CCNH) Genomic Order:  1199
Name:  ? Bradi1g09370 Secondary Identifier:  ? PAC:32794570
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g09370 0.5kb upstream 0.5kb upstream 10107 true Bd1: 6731227-6741333 Brachypodium distachyon
Bradi1g09370 0.5kb upstream 0.5kb upstream 500 false Bd1: 6740834-6741333 Brachypodium distachyon
Bradi1g09370 0.5kb downstream 0.5kb downstream 10107 true Bd1: 6730727-6740833 Brachypodium distachyon
Bradi1g09370 0.5kb downstream 0.5kb downstream 500 false Bd1: 6730727-6731226 Brachypodium distachyon
Bradi1g09370 1.0kb upstream 1.0kb upstream 10607 true Bd1: 6731227-6741833 Brachypodium distachyon
Bradi1g09370 1.0kb upstream 1.0kb upstream 1000 false Bd1: 6740834-6741833 Brachypodium distachyon
Bradi1g09370 1.0kb downstream 1.0kb downstream 10607 true Bd1: 6730227-6740833 Brachypodium distachyon
Bradi1g09370 1.0kb downstream 1.0kb downstream 1000 false Bd1: 6730227-6731226 Brachypodium distachyon
Bradi1g09370 2.0kb upstream 2.0kb upstream 11607 true Bd1: 6731227-6742833 Brachypodium distachyon
Bradi1g09370 2.0kb upstream 2.0kb upstream 2000 false Bd1: 6740834-6742833 Brachypodium distachyon
Bradi1g09370 2.0kb downstream 2.0kb downstream 11607 true Bd1: 6729227-6740833 Brachypodium distachyon
Bradi1g09370 2.0kb downstream 2.0kb downstream 2000 false Bd1: 6729227-6731226 Brachypodium distachyon
Bradi1g09370 5.0kb upstream 5.0kb upstream 14607 true Bd1: 6731227-6745833 Brachypodium distachyon
Bradi1g09370 5.0kb upstream 5.0kb upstream 5000 false Bd1: 6740834-6745833 Brachypodium distachyon
Bradi1g09370 5.0kb downstream 5.0kb downstream 14607 true Bd1: 6726227-6740833 Brachypodium distachyon
Bradi1g09370 5.0kb downstream 5.0kb downstream 5000 false Bd1: 6726227-6731226 Brachypodium distachyon
Bradi1g09370 10.0kb upstream 10.0kb upstream 19607 true Bd1: 6731227-6750833 Brachypodium distachyon
Bradi1g09370 10.0kb upstream 10.0kb upstream 10000 false Bd1: 6740834-6750833 Brachypodium distachyon
Bradi1g09370 10.0kb downstream 10.0kb downstream 19607 true Bd1: 6721227-6740833 Brachypodium distachyon
Bradi1g09370 10.0kb downstream 10.0kb downstream 10000 false Bd1: 6721227-6731226 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575508 5269 Grass View MSA
122044761 5273 Angiosperm View MSA
121344916 5274 Embryophyte View MSA
123425113 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.557        
cufflinks 0.714        
cufflinks 0.728        
cufflinks 0.655        
cufflinks 0.286       Low
cufflinks 0.509        
cufflinks 0.579        
cufflinks 0.49        
cufflinks 0.558        
cufflinks 0.55        
cufflinks 0.535        
cufflinks 0.403        
cufflinks 0.341       Low
cufflinks 0.443        
cufflinks 0.355        
cufflinks 0.56        
cufflinks 0.355        
cufflinks 0.883       High
cufflinks 0.688        
cufflinks 0.295       Low
cufflinks 0.494        
cufflinks 0.613        
cufflinks 0.453        
cufflinks 0.5        
cufflinks 0.619        
cufflinks 0.793       High
cufflinks 0.444        
cufflinks 0.781       High
cufflinks 0.691        
cufflinks 0.468        

0 Strain