Gene : Bradi1g10047 B. distachyon v3.1
Defline:  (1 of 1) PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Genomic Order:  1282
Name:  ? Bradi1g10047 Secondary Identifier:  ? PAC:32796793
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g10047 0.5kb upstream 0.5kb upstream 7918 true Bd1: 7234956-7242873 Brachypodium distachyon
Bradi1g10047 0.5kb upstream 0.5kb upstream 500 false Bd1: 7234956-7235455 Brachypodium distachyon
Bradi1g10047 0.5kb downstream 0.5kb downstream 7918 true Bd1: 7235456-7243373 Brachypodium distachyon
Bradi1g10047 0.5kb downstream 0.5kb downstream 500 false Bd1: 7242874-7243373 Brachypodium distachyon
Bradi1g10047 1.0kb upstream 1.0kb upstream 8418 true Bd1: 7234456-7242873 Brachypodium distachyon
Bradi1g10047 1.0kb upstream 1.0kb upstream 1000 false Bd1: 7234456-7235455 Brachypodium distachyon
Bradi1g10047 1.0kb downstream 1.0kb downstream 8418 true Bd1: 7235456-7243873 Brachypodium distachyon
Bradi1g10047 1.0kb downstream 1.0kb downstream 1000 false Bd1: 7242874-7243873 Brachypodium distachyon
Bradi1g10047 2.0kb upstream 2.0kb upstream 9418 true Bd1: 7233456-7242873 Brachypodium distachyon
Bradi1g10047 2.0kb upstream 2.0kb upstream 2000 false Bd1: 7233456-7235455 Brachypodium distachyon
Bradi1g10047 2.0kb downstream 2.0kb downstream 9418 true Bd1: 7235456-7244873 Brachypodium distachyon
Bradi1g10047 2.0kb downstream 2.0kb downstream 2000 false Bd1: 7242874-7244873 Brachypodium distachyon
Bradi1g10047 5.0kb upstream 5.0kb upstream 12418 true Bd1: 7230456-7242873 Brachypodium distachyon
Bradi1g10047 5.0kb upstream 5.0kb upstream 5000 false Bd1: 7230456-7235455 Brachypodium distachyon
Bradi1g10047 5.0kb downstream 5.0kb downstream 12418 true Bd1: 7235456-7247873 Brachypodium distachyon
Bradi1g10047 5.0kb downstream 5.0kb downstream 5000 false Bd1: 7242874-7247873 Brachypodium distachyon
Bradi1g10047 10.0kb upstream 10.0kb upstream 17418 true Bd1: 7225456-7242873 Brachypodium distachyon
Bradi1g10047 10.0kb upstream 10.0kb upstream 10000 false Bd1: 7225456-7235455 Brachypodium distachyon
Bradi1g10047 10.0kb downstream 10.0kb downstream 17418 true Bd1: 7235456-7252873 Brachypodium distachyon
Bradi1g10047 10.0kb downstream 10.0kb downstream 10000 false Bd1: 7242874-7252873 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583154 5269 Grass View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.5        
cufflinks 0.364        
cufflinks 0.385        
cufflinks 0.293        
cufflinks 0.141        
cufflinks 0.186        
cufflinks 0.388        
cufflinks 0.164        
cufflinks 0.346        
cufflinks 0.309        
cufflinks 0.016     Low Low
cufflinks 0.161        
cufflinks 0.016     Low Low
cufflinks 0.002     Low Low
cufflinks 0.033     Low Low
cufflinks 0.517        
cufflinks 0.248        
cufflinks 0.854       High
cufflinks 0.352        
cufflinks 0.123     Low  
cufflinks 7.836       High
cufflinks 0.219        
cufflinks 0.282        
cufflinks 0.096     Low  
cufflinks 0.306        
cufflinks 0.418        
cufflinks 0.009     Low Low
cufflinks 0.486        
cufflinks 0.456        
cufflinks 1.145       High

0 Strain