Gene : Bradi1g10270 B. distachyon v3.1
Defline:  (1 of 1) PTHR10174//PTHR10174:SF149 - RETINALDEHYDE BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1305
Name:  ? Bradi1g10270 Secondary Identifier:  ? PAC:32805620
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g10270 0.5kb upstream 0.5kb upstream 6333 true Bd1: 7413705-7420037 Brachypodium distachyon
Bradi1g10270 0.5kb upstream 0.5kb upstream 500 false Bd1: 7419538-7420037 Brachypodium distachyon
Bradi1g10270 0.5kb downstream 0.5kb downstream 6333 true Bd1: 7413205-7419537 Brachypodium distachyon
Bradi1g10270 0.5kb downstream 0.5kb downstream 500 false Bd1: 7413205-7413704 Brachypodium distachyon
Bradi1g10270 1.0kb upstream 1.0kb upstream 6833 true Bd1: 7413705-7420537 Brachypodium distachyon
Bradi1g10270 1.0kb upstream 1.0kb upstream 1000 false Bd1: 7419538-7420537 Brachypodium distachyon
Bradi1g10270 1.0kb downstream 1.0kb downstream 6833 true Bd1: 7412705-7419537 Brachypodium distachyon
Bradi1g10270 1.0kb downstream 1.0kb downstream 1000 false Bd1: 7412705-7413704 Brachypodium distachyon
Bradi1g10270 2.0kb upstream 2.0kb upstream 7833 true Bd1: 7413705-7421537 Brachypodium distachyon
Bradi1g10270 2.0kb upstream 2.0kb upstream 2000 false Bd1: 7419538-7421537 Brachypodium distachyon
Bradi1g10270 2.0kb downstream 2.0kb downstream 7833 true Bd1: 7411705-7419537 Brachypodium distachyon
Bradi1g10270 2.0kb downstream 2.0kb downstream 2000 false Bd1: 7411705-7413704 Brachypodium distachyon
Bradi1g10270 5.0kb upstream 5.0kb upstream 10833 true Bd1: 7413705-7424537 Brachypodium distachyon
Bradi1g10270 5.0kb upstream 5.0kb upstream 5000 false Bd1: 7419538-7424537 Brachypodium distachyon
Bradi1g10270 5.0kb downstream 5.0kb downstream 10833 true Bd1: 7408705-7419537 Brachypodium distachyon
Bradi1g10270 5.0kb downstream 5.0kb downstream 5000 false Bd1: 7408705-7413704 Brachypodium distachyon
Bradi1g10270 10.0kb upstream 10.0kb upstream 15833 true Bd1: 7413705-7429537 Brachypodium distachyon
Bradi1g10270 10.0kb upstream 10.0kb upstream 10000 false Bd1: 7419538-7429537 Brachypodium distachyon
Bradi1g10270 10.0kb downstream 10.0kb downstream 15833 true Bd1: 7403705-7419537 Brachypodium distachyon
Bradi1g10270 10.0kb downstream 10.0kb downstream 10000 false Bd1: 7403705-7413704 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589143 5269 Grass View MSA
122046588 5273 Angiosperm View MSA
121350309 5274 Embryophyte View MSA
123427540 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.329        
cufflinks 0.619        
cufflinks 0.63        
cufflinks 0.69        
cufflinks 1.058        
cufflinks 0.768        
cufflinks 0.518       Low
cufflinks 1.334        
cufflinks 1.016        
cufflinks 0.67        
cufflinks 1.916        
cufflinks 1.137        
cufflinks 1.006        
cufflinks 0.809        
cufflinks 3.222       High
cufflinks 0.739        
cufflinks 1.46        
cufflinks 4.041       High
cufflinks 1.595        
cufflinks 0.508       Low
cufflinks 1.584        
cufflinks 0.78        
cufflinks 1.606        
cufflinks 1.396        
cufflinks 0.816        
cufflinks 0.629        
cufflinks 1.116        
cufflinks 0.571       Low
cufflinks 0.656        
cufflinks 1.125        

0 Strain