Gene : Bradi1g10810 B. distachyon v3.1
Defline:  (1 of 1) PTHR12707 - PINN Genomic Order:  1367
Name:  ? Bradi1g10810 Secondary Identifier:  ? PAC:32798970
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g10810 0.5kb upstream 0.5kb upstream 5126 true Bd1: 7863078-7868203 Brachypodium distachyon
Bradi1g10810 0.5kb upstream 0.5kb upstream 500 false Bd1: 7863078-7863577 Brachypodium distachyon
Bradi1g10810 0.5kb downstream 0.5kb downstream 5126 true Bd1: 7863578-7868703 Brachypodium distachyon
Bradi1g10810 0.5kb downstream 0.5kb downstream 500 false Bd1: 7868204-7868703 Brachypodium distachyon
Bradi1g10810 1.0kb upstream 1.0kb upstream 5626 true Bd1: 7862578-7868203 Brachypodium distachyon
Bradi1g10810 1.0kb upstream 1.0kb upstream 1000 false Bd1: 7862578-7863577 Brachypodium distachyon
Bradi1g10810 1.0kb downstream 1.0kb downstream 5626 true Bd1: 7863578-7869203 Brachypodium distachyon
Bradi1g10810 1.0kb downstream 1.0kb downstream 1000 false Bd1: 7868204-7869203 Brachypodium distachyon
Bradi1g10810 2.0kb upstream 2.0kb upstream 6626 true Bd1: 7861578-7868203 Brachypodium distachyon
Bradi1g10810 2.0kb upstream 2.0kb upstream 2000 false Bd1: 7861578-7863577 Brachypodium distachyon
Bradi1g10810 2.0kb downstream 2.0kb downstream 6626 true Bd1: 7863578-7870203 Brachypodium distachyon
Bradi1g10810 2.0kb downstream 2.0kb downstream 2000 false Bd1: 7868204-7870203 Brachypodium distachyon
Bradi1g10810 5.0kb upstream 5.0kb upstream 9626 true Bd1: 7858578-7868203 Brachypodium distachyon
Bradi1g10810 5.0kb upstream 5.0kb upstream 5000 false Bd1: 7858578-7863577 Brachypodium distachyon
Bradi1g10810 5.0kb downstream 5.0kb downstream 9626 true Bd1: 7863578-7873203 Brachypodium distachyon
Bradi1g10810 5.0kb downstream 5.0kb downstream 5000 false Bd1: 7868204-7873203 Brachypodium distachyon
Bradi1g10810 10.0kb upstream 10.0kb upstream 14626 true Bd1: 7853578-7868203 Brachypodium distachyon
Bradi1g10810 10.0kb upstream 10.0kb upstream 10000 false Bd1: 7853578-7863577 Brachypodium distachyon
Bradi1g10810 10.0kb downstream 10.0kb downstream 14626 true Bd1: 7863578-7878203 Brachypodium distachyon
Bradi1g10810 10.0kb downstream 10.0kb downstream 10000 false Bd1: 7868204-7878203 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579398 5269 Grass View MSA
122046264 5273 Angiosperm View MSA
121351481 5274 Embryophyte View MSA
123426416 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.217        
cufflinks 15.007     High  
cufflinks 15.115     High  
cufflinks 14.322     High  
cufflinks 7.392       Low
cufflinks 12.483     High  
cufflinks 13.985     High  
cufflinks 11.659     High  
cufflinks 13.113     High  
cufflinks 13.993     High  
cufflinks 13.75     High  
cufflinks 9.884     High  
cufflinks 8.685     High Low
cufflinks 11.352     High  
cufflinks 7.526       Low
cufflinks 12.023     High  
cufflinks 10.293        
cufflinks 13.002     High  
cufflinks 10.449        
cufflinks 6.439       Low
cufflinks 10.774        
cufflinks 14.579     High  
cufflinks 12.079     High  
cufflinks 11.279     High  
cufflinks 13.742     High  
cufflinks 15.012     High  
cufflinks 14.429     High  
cufflinks 16.635     High High
cufflinks 14.951     High  
cufflinks 11.479     High  

0 Strain