Gene : Bradi1g10990 B. distachyon v3.1
Defline:  (1 of 4) PTHR10871 - 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 Genomic Order:  1390
Name:  ? Bradi1g10990 Secondary Identifier:  ? PAC:32803966
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g10990 0.5kb upstream 0.5kb upstream 2268 true Bd1: 7994015-7996282 Brachypodium distachyon
Bradi1g10990 0.5kb upstream 0.5kb upstream 500 false Bd1: 7994015-7994514 Brachypodium distachyon
Bradi1g10990 0.5kb downstream 0.5kb downstream 2268 true Bd1: 7994515-7996782 Brachypodium distachyon
Bradi1g10990 0.5kb downstream 0.5kb downstream 500 false Bd1: 7996283-7996782 Brachypodium distachyon
Bradi1g10990 1.0kb upstream 1.0kb upstream 2768 true Bd1: 7993515-7996282 Brachypodium distachyon
Bradi1g10990 1.0kb upstream 1.0kb upstream 1000 false Bd1: 7993515-7994514 Brachypodium distachyon
Bradi1g10990 1.0kb downstream 1.0kb downstream 2768 true Bd1: 7994515-7997282 Brachypodium distachyon
Bradi1g10990 1.0kb downstream 1.0kb downstream 1000 false Bd1: 7996283-7997282 Brachypodium distachyon
Bradi1g10990 2.0kb upstream 2.0kb upstream 3768 true Bd1: 7992515-7996282 Brachypodium distachyon
Bradi1g10990 2.0kb upstream 2.0kb upstream 2000 false Bd1: 7992515-7994514 Brachypodium distachyon
Bradi1g10990 2.0kb downstream 2.0kb downstream 3768 true Bd1: 7994515-7998282 Brachypodium distachyon
Bradi1g10990 2.0kb downstream 2.0kb downstream 2000 false Bd1: 7996283-7998282 Brachypodium distachyon
Bradi1g10990 5.0kb upstream 5.0kb upstream 6768 true Bd1: 7989515-7996282 Brachypodium distachyon
Bradi1g10990 5.0kb upstream 5.0kb upstream 5000 false Bd1: 7989515-7994514 Brachypodium distachyon
Bradi1g10990 5.0kb downstream 5.0kb downstream 6768 true Bd1: 7994515-8001282 Brachypodium distachyon
Bradi1g10990 5.0kb downstream 5.0kb downstream 5000 false Bd1: 7996283-8001282 Brachypodium distachyon
Bradi1g10990 10.0kb upstream 10.0kb upstream 11768 true Bd1: 7984515-7996282 Brachypodium distachyon
Bradi1g10990 10.0kb upstream 10.0kb upstream 10000 false Bd1: 7984515-7994514 Brachypodium distachyon
Bradi1g10990 10.0kb downstream 10.0kb downstream 11768 true Bd1: 7994515-8006282 Brachypodium distachyon
Bradi1g10990 10.0kb downstream 10.0kb downstream 10000 false Bd1: 7996283-8006282 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578274 5269 Grass View MSA
122043008 5273 Angiosperm View MSA
121343902 5274 Embryophyte View MSA
123426379 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 286.865     High  
cufflinks 283.157     High  
cufflinks 274.641     High  
cufflinks 322.1     High  
cufflinks 297.779     High  
cufflinks 236.745     High  
cufflinks 280.209     High  
cufflinks 243.808     High  
cufflinks 210.139     High  
cufflinks 375.535     High  
cufflinks 147.318     High  
cufflinks 234.016     High  
cufflinks 144.9     High  
cufflinks 154.568     High  
cufflinks 233.828     High  
cufflinks 257.648     High  
cufflinks 315.276     High  
cufflinks 17.65     High Low
cufflinks 236.153     High  
cufflinks 40.978     High Low
cufflinks 166.812     High  
cufflinks 247.07     High  
cufflinks 219.862     High  
cufflinks 217.011     High  
cufflinks 265.763     High  
cufflinks 325.696     High  
cufflinks 83.267     High Low
cufflinks 298.408     High  
cufflinks 300.662     High  
cufflinks 253.903     High  

0 Strain