Gene : Bradi1g11010 B. distachyon v3.1
Defline:  (1 of 1) PTHR12197//PTHR12197:SF165 - SET AND MYND DOMAIN CONTAINING // HISTONE-LYSINE N-METHYLTRANSFERASE ASHR1 Genomic Order:  1392
Name:  ? Bradi1g11010 Secondary Identifier:  ? PAC:32798949
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g11010 0.5kb upstream 0.5kb upstream 7401 true Bd1: 7999365-8006765 Brachypodium distachyon
Bradi1g11010 0.5kb upstream 0.5kb upstream 500 false Bd1: 8006266-8006765 Brachypodium distachyon
Bradi1g11010 0.5kb downstream 0.5kb downstream 7401 true Bd1: 7998865-8006265 Brachypodium distachyon
Bradi1g11010 0.5kb downstream 0.5kb downstream 500 false Bd1: 7998865-7999364 Brachypodium distachyon
Bradi1g11010 1.0kb upstream 1.0kb upstream 7901 true Bd1: 7999365-8007265 Brachypodium distachyon
Bradi1g11010 1.0kb upstream 1.0kb upstream 1000 false Bd1: 8006266-8007265 Brachypodium distachyon
Bradi1g11010 1.0kb downstream 1.0kb downstream 7901 true Bd1: 7998365-8006265 Brachypodium distachyon
Bradi1g11010 1.0kb downstream 1.0kb downstream 1000 false Bd1: 7998365-7999364 Brachypodium distachyon
Bradi1g11010 2.0kb upstream 2.0kb upstream 8901 true Bd1: 7999365-8008265 Brachypodium distachyon
Bradi1g11010 2.0kb upstream 2.0kb upstream 2000 false Bd1: 8006266-8008265 Brachypodium distachyon
Bradi1g11010 2.0kb downstream 2.0kb downstream 8901 true Bd1: 7997365-8006265 Brachypodium distachyon
Bradi1g11010 2.0kb downstream 2.0kb downstream 2000 false Bd1: 7997365-7999364 Brachypodium distachyon
Bradi1g11010 5.0kb upstream 5.0kb upstream 11901 true Bd1: 7999365-8011265 Brachypodium distachyon
Bradi1g11010 5.0kb upstream 5.0kb upstream 5000 false Bd1: 8006266-8011265 Brachypodium distachyon
Bradi1g11010 5.0kb downstream 5.0kb downstream 11901 true Bd1: 7994365-8006265 Brachypodium distachyon
Bradi1g11010 5.0kb downstream 5.0kb downstream 5000 false Bd1: 7994365-7999364 Brachypodium distachyon
Bradi1g11010 10.0kb upstream 10.0kb upstream 16901 true Bd1: 7999365-8016265 Brachypodium distachyon
Bradi1g11010 10.0kb upstream 10.0kb upstream 10000 false Bd1: 8006266-8016265 Brachypodium distachyon
Bradi1g11010 10.0kb downstream 10.0kb downstream 16901 true Bd1: 7989365-8006265 Brachypodium distachyon
Bradi1g11010 10.0kb downstream 10.0kb downstream 10000 false Bd1: 7989365-7999364 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569742 5269 Grass View MSA
122047928 5273 Angiosperm View MSA
121346419 5274 Embryophyte View MSA
123428850 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.327       Low
cufflinks 5.989       High
cufflinks 5.323       High
cufflinks 6.212       High
cufflinks 2.177       Low
cufflinks 4.115        
cufflinks 4.744        
cufflinks 3.795        
cufflinks 4.048        
cufflinks 3.649        
cufflinks 6.498       High
cufflinks 3.416        
cufflinks 3.92        
cufflinks 4.295        
cufflinks 2.116       Low
cufflinks 3.951        
cufflinks 3.047        
cufflinks 3.39        
cufflinks 4.824        
cufflinks 1.405       Low
cufflinks 2.752        
cufflinks 4.04        
cufflinks 3.947        
cufflinks 3.362        
cufflinks 4.126        
cufflinks 4.462        
cufflinks 3.528        
cufflinks 4.297        
cufflinks 3.822        
cufflinks 3.246        

0 Strain