Gene : Bradi1g11040 B. distachyon v3.1
Defline:  (1 of 1) PTHR23086:SF33 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 1-RELATED Genomic Order:  1395
Name:  ? Bradi1g11040 Secondary Identifier:  ? PAC:32805142
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6351 Brachypodium distachyon pathologic  
Bdistachyon PWY-6352 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g11040 0.5kb upstream 0.5kb upstream 5705 true Bd1: 8044119-8049823 Brachypodium distachyon
Bradi1g11040 0.5kb upstream 0.5kb upstream 500 false Bd1: 8049324-8049823 Brachypodium distachyon
Bradi1g11040 0.5kb downstream 0.5kb downstream 5705 true Bd1: 8043619-8049323 Brachypodium distachyon
Bradi1g11040 0.5kb downstream 0.5kb downstream 500 false Bd1: 8043619-8044118 Brachypodium distachyon
Bradi1g11040 1.0kb upstream 1.0kb upstream 6205 true Bd1: 8044119-8050323 Brachypodium distachyon
Bradi1g11040 1.0kb upstream 1.0kb upstream 1000 false Bd1: 8049324-8050323 Brachypodium distachyon
Bradi1g11040 1.0kb downstream 1.0kb downstream 6205 true Bd1: 8043119-8049323 Brachypodium distachyon
Bradi1g11040 1.0kb downstream 1.0kb downstream 1000 false Bd1: 8043119-8044118 Brachypodium distachyon
Bradi1g11040 2.0kb upstream 2.0kb upstream 7205 true Bd1: 8044119-8051323 Brachypodium distachyon
Bradi1g11040 2.0kb upstream 2.0kb upstream 2000 false Bd1: 8049324-8051323 Brachypodium distachyon
Bradi1g11040 2.0kb downstream 2.0kb downstream 7205 true Bd1: 8042119-8049323 Brachypodium distachyon
Bradi1g11040 2.0kb downstream 2.0kb downstream 2000 false Bd1: 8042119-8044118 Brachypodium distachyon
Bradi1g11040 5.0kb upstream 5.0kb upstream 10205 true Bd1: 8044119-8054323 Brachypodium distachyon
Bradi1g11040 5.0kb upstream 5.0kb upstream 5000 false Bd1: 8049324-8054323 Brachypodium distachyon
Bradi1g11040 5.0kb downstream 5.0kb downstream 10205 true Bd1: 8039119-8049323 Brachypodium distachyon
Bradi1g11040 5.0kb downstream 5.0kb downstream 5000 false Bd1: 8039119-8044118 Brachypodium distachyon
Bradi1g11040 10.0kb upstream 10.0kb upstream 15205 true Bd1: 8044119-8059323 Brachypodium distachyon
Bradi1g11040 10.0kb upstream 10.0kb upstream 10000 false Bd1: 8049324-8059323 Brachypodium distachyon
Bradi1g11040 10.0kb downstream 10.0kb downstream 15205 true Bd1: 8034119-8049323 Brachypodium distachyon
Bradi1g11040 10.0kb downstream 10.0kb downstream 10000 false Bd1: 8034119-8044118 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568794 5269 Grass View MSA
122045455 5273 Angiosperm View MSA
121310450 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.07        
cufflinks 1.122        
cufflinks 1.072        
cufflinks 1.086        
cufflinks 0.571        
cufflinks 1.066        
cufflinks 1.044        
cufflinks 0.864        
cufflinks 1.073        
cufflinks 0.777        
cufflinks 0.617        
cufflinks 0.945        
cufflinks 0.428       Low
cufflinks 0.442       Low
cufflinks 0.713        
cufflinks 1.052        
cufflinks 0.868        
cufflinks 1.444       High
cufflinks 0.821        
cufflinks 0.4       Low
cufflinks 1.387       High
cufflinks 1.102        
cufflinks 0.907        
cufflinks 0.954        
cufflinks 1.122        
cufflinks 0.929        
cufflinks 0.512       Low
cufflinks 0.934        
cufflinks 0.947        
cufflinks 1.449       High

0 Strain