Gene : Bradi1g06380 B. distachyon v3.1
Defline:  (1 of 1) PTHR12975 - TRANSPORT PROTEIN TRAPP Genomic Order:  820
Name:  ? Bradi1g06380 Secondary Identifier:  ? PAC:32805818
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g06380 0.5kb upstream 0.5kb upstream 14095 true Bd1: 4271207-4285301 Brachypodium distachyon
Bradi1g06380 0.5kb upstream 0.5kb upstream 500 false Bd1: 4284802-4285301 Brachypodium distachyon
Bradi1g06380 0.5kb downstream 0.5kb downstream 14095 true Bd1: 4270707-4284801 Brachypodium distachyon
Bradi1g06380 0.5kb downstream 0.5kb downstream 500 false Bd1: 4270707-4271206 Brachypodium distachyon
Bradi1g06380 1.0kb upstream 1.0kb upstream 14595 true Bd1: 4271207-4285801 Brachypodium distachyon
Bradi1g06380 1.0kb upstream 1.0kb upstream 1000 false Bd1: 4284802-4285801 Brachypodium distachyon
Bradi1g06380 1.0kb downstream 1.0kb downstream 14595 true Bd1: 4270207-4284801 Brachypodium distachyon
Bradi1g06380 1.0kb downstream 1.0kb downstream 1000 false Bd1: 4270207-4271206 Brachypodium distachyon
Bradi1g06380 2.0kb upstream 2.0kb upstream 15595 true Bd1: 4271207-4286801 Brachypodium distachyon
Bradi1g06380 2.0kb upstream 2.0kb upstream 2000 false Bd1: 4284802-4286801 Brachypodium distachyon
Bradi1g06380 2.0kb downstream 2.0kb downstream 15595 true Bd1: 4269207-4284801 Brachypodium distachyon
Bradi1g06380 2.0kb downstream 2.0kb downstream 2000 false Bd1: 4269207-4271206 Brachypodium distachyon
Bradi1g06380 5.0kb upstream 5.0kb upstream 18595 true Bd1: 4271207-4289801 Brachypodium distachyon
Bradi1g06380 5.0kb upstream 5.0kb upstream 5000 false Bd1: 4284802-4289801 Brachypodium distachyon
Bradi1g06380 5.0kb downstream 5.0kb downstream 18595 true Bd1: 4266207-4284801 Brachypodium distachyon
Bradi1g06380 5.0kb downstream 5.0kb downstream 5000 false Bd1: 4266207-4271206 Brachypodium distachyon
Bradi1g06380 10.0kb upstream 10.0kb upstream 23595 true Bd1: 4271207-4294801 Brachypodium distachyon
Bradi1g06380 10.0kb upstream 10.0kb upstream 10000 false Bd1: 4284802-4294801 Brachypodium distachyon
Bradi1g06380 10.0kb downstream 10.0kb downstream 23595 true Bd1: 4261207-4284801 Brachypodium distachyon
Bradi1g06380 10.0kb downstream 10.0kb downstream 10000 false Bd1: 4261207-4271206 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573059 5269 Grass View MSA
122044079 5273 Angiosperm View MSA
121345213 5274 Embryophyte View MSA
123428270 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.876        
cufflinks 1.49        
cufflinks 1.343        
cufflinks 1.086        
cufflinks 0.387       Low
cufflinks 1.255        
cufflinks 1.179        
cufflinks 0.99        
cufflinks 1.245        
cufflinks 0.65        
cufflinks 1.081        
cufflinks 1.212        
cufflinks 0.832        
cufflinks 0.768        
cufflinks 0.712        
cufflinks 1.298        
cufflinks 0.617        
cufflinks 2.388       High
cufflinks 0.845        
cufflinks 0.423       Low
cufflinks 0.897        
cufflinks 1.314        
cufflinks 0.982        
cufflinks 1.071        
cufflinks 0.994        
cufflinks 1.204        
cufflinks 1.062        
cufflinks 1.126        
cufflinks 1.107        
cufflinks 1.301        

0 Strain