Gene : Bradi1g06590 B. distachyon v3.1
Defline:  (1 of 1) PTHR14467 - ARV1 Genomic Order:  846
Name:  ? Bradi1g06590 Secondary Identifier:  ? PAC:32793381
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g06590 0.5kb upstream 0.5kb upstream 6771 true Bd1: 4414620-4421390 Brachypodium distachyon
Bradi1g06590 0.5kb upstream 0.5kb upstream 500 false Bd1: 4414620-4415119 Brachypodium distachyon
Bradi1g06590 0.5kb downstream 0.5kb downstream 6771 true Bd1: 4415120-4421890 Brachypodium distachyon
Bradi1g06590 0.5kb downstream 0.5kb downstream 500 false Bd1: 4421391-4421890 Brachypodium distachyon
Bradi1g06590 1.0kb upstream 1.0kb upstream 7271 true Bd1: 4414120-4421390 Brachypodium distachyon
Bradi1g06590 1.0kb upstream 1.0kb upstream 1000 false Bd1: 4414120-4415119 Brachypodium distachyon
Bradi1g06590 1.0kb downstream 1.0kb downstream 7271 true Bd1: 4415120-4422390 Brachypodium distachyon
Bradi1g06590 1.0kb downstream 1.0kb downstream 1000 false Bd1: 4421391-4422390 Brachypodium distachyon
Bradi1g06590 2.0kb upstream 2.0kb upstream 8271 true Bd1: 4413120-4421390 Brachypodium distachyon
Bradi1g06590 2.0kb upstream 2.0kb upstream 2000 false Bd1: 4413120-4415119 Brachypodium distachyon
Bradi1g06590 2.0kb downstream 2.0kb downstream 8271 true Bd1: 4415120-4423390 Brachypodium distachyon
Bradi1g06590 2.0kb downstream 2.0kb downstream 2000 false Bd1: 4421391-4423390 Brachypodium distachyon
Bradi1g06590 5.0kb upstream 5.0kb upstream 11271 true Bd1: 4410120-4421390 Brachypodium distachyon
Bradi1g06590 5.0kb upstream 5.0kb upstream 5000 false Bd1: 4410120-4415119 Brachypodium distachyon
Bradi1g06590 5.0kb downstream 5.0kb downstream 11271 true Bd1: 4415120-4426390 Brachypodium distachyon
Bradi1g06590 5.0kb downstream 5.0kb downstream 5000 false Bd1: 4421391-4426390 Brachypodium distachyon
Bradi1g06590 10.0kb upstream 10.0kb upstream 16271 true Bd1: 4405120-4421390 Brachypodium distachyon
Bradi1g06590 10.0kb upstream 10.0kb upstream 10000 false Bd1: 4405120-4415119 Brachypodium distachyon
Bradi1g06590 10.0kb downstream 10.0kb downstream 16271 true Bd1: 4415120-4431390 Brachypodium distachyon
Bradi1g06590 10.0kb downstream 10.0kb downstream 10000 false Bd1: 4421391-4431390 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573651 5269 Grass View MSA
122045663 5273 Angiosperm View MSA
121347718 5274 Embryophyte View MSA
123380605 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.881       Low
cufflinks 1.725        
cufflinks 2.029        
cufflinks 1.907        
cufflinks 1.299        
cufflinks 1.549        
cufflinks 1.437        
cufflinks 1.553        
cufflinks 1.656        
cufflinks 2.165        
cufflinks 1.594        
cufflinks 1.219        
cufflinks 1.054        
cufflinks 1.169        
cufflinks 0.973       Low
cufflinks 1.499        
cufflinks 1.388        
cufflinks 1.844        
cufflinks 2.446       High
cufflinks 0.575       Low
cufflinks 1.837        
cufflinks 1.697        
cufflinks 1.624        
cufflinks 1.456        
cufflinks 1.622        
cufflinks 2.451       High
cufflinks 1.831        
cufflinks 2.402       High
cufflinks 2.032        
cufflinks 1.485        

0 Strain